RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 BMP4P12644 408 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 POLR2HP52434 150 aaKnown RBP17.4■□□□□ 0.38
NELFE-212ENST00000492539 HPCAP84074 193 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 CHRNB3Q05901 458 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 RNF130Q86XS8 419 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 TSPEARQ8WU66 669 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 PMM1Q92871 262 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 BOD1Q96IK1 185 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 BEX2Q9BXY8 128 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 PAIP1Q9H074 479 aaKnown RBP17.4■□□□□ 0.38
NELFE-212ENST00000492539 SLC38A1Q9H2H9 487 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 SAR1AQ9NR31 198 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 PMF1-BGLAPU3KQ54 211 aa17.4■□□□□ 0.38
NELFE-212ENST00000492539 A0A096LPI6 279 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 AGAP5A6NIR3 686 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 VWC2LB2RUY7 222 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 ATP6V1G2-DDX39BF2Z307 99 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 HOXB9P17482 250 aaPredicted RBP17.39■□□□□ 0.37
NELFE-212ENST00000492539 DRD4P21917 467 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 USF1P22415 310 aaPredicted RBP17.39■□□□□ 0.37
NELFE-212ENST00000492539 TACR3P29371 465 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 MPGP29372 298 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 THBS2P35442 1172 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 MAP2K6P52564 334 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 TGFBR3Q03167 851 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 SYPL1Q16563 259 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 SWI5Q1ZZU3 235 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 GTDC1Q4AE62 458 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 LRIF1Q5T3J3 769 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 PAQR6Q6TCH4 344 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 SPATA21Q7Z572 469 aa17.39■□□□□ 0.37
NELFE-212ENST00000492539 TRNT1Q96Q11 434 aaKnown RBP17.39■□□□□ 0.37
NELFE-212ENST00000492539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.38■□□□□ 0.374e-6■■■■□ 20.7
NELFE-212ENST00000492539 ZC3H12DA2A288 527 aaKnown RBP17.38■□□□□ 0.37
NELFE-212ENST00000492539 LY6HO94772 140 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 CHRM4P08173 479 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 RPS4Y1P22090 263 aaKnown RBP17.38■□□□□ 0.37
NELFE-212ENST00000492539 SLC1A3P43003 542 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 ANXA11P50995 505 aaKnown RBP17.38■□□□□ 0.37
NELFE-212ENST00000492539 PRPS1P60891 318 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 LSM11P83369 360 aaKnown RBP eCLIP17.38■□□□□ 0.37
NELFE-212ENST00000492539 EPS8Q12929 822 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 MST1LQ2TV78 715 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 PAGE3Q5JUK9 113 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 ANKFN1Q8N957 763 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 ZIC4Q8N9L1 334 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 ELAC2Q9BQ52 826 aaKnown RBP17.38■□□□□ 0.37
NELFE-212ENST00000492539 SHARPINQ9H0F6 387 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 TPT1P8Q9HAU6 139 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 LEF1Q9UJU2 399 aaPredicted RBP17.38■□□□□ 0.37
NELFE-212ENST00000492539 PCDHB14Q9Y5E9 798 aa17.38■□□□□ 0.37
NELFE-212ENST00000492539 LMX1BO60663 402 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 WNT11O96014 354 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 MVDP53602 400 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 KLF10Q13118 480 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 KRTAP24-1Q3LI83 254 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 OTUD3Q5T2D3 398 aaPredicted RBP17.37■□□□□ 0.37
NELFE-212ENST00000492539 LRRC74BQ6ZQY2 392 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 CPLX4Q7Z7G2 160 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 PNPT1Q8TCS8 783 aaKnown RBP17.37■□□□□ 0.37
NELFE-212ENST00000492539 WDR60Q8WVS4 1066 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 ZNF385AQ96PM9 386 aaKnown RBP17.37■□□□□ 0.37
NELFE-212ENST00000492539 SF3B5Q9BWJ5 86 aaKnown RBP17.37■□□□□ 0.37
NELFE-212ENST00000492539 ADAM19Q9H013 955 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 FAM107BQ9H098 131 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 PIF1Q9H611 641 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 NDUFAF1Q9Y375 327 aa17.37■□□□□ 0.37
NELFE-212ENST00000492539 NDUFS8O00217 210 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 ANGPT2O15123 496 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 SLC22A2O15244 555 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 SNX3O60493 162 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 IGFBP5P24593 272 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 GZMKP49863 264 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 COX20Q5RI15 118 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 MSRB3Q8IXL7 192 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 DPP10Q8N608 796 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 ARIH2OSQ8N7S6 290 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 TMEM99Q8N816 258 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 POMGNT2Q8NAT1 580 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 AURKBQ96GD4 344 aaPredicted RBP17.36■□□□□ 0.37
NELFE-212ENST00000492539 SORCS2Q96PQ0 1159 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 OBP2BQ9NPH6 170 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 SLC25A37Q9NYZ2 338 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 SLAMF8Q9P0V8 285 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 MOKQ9UQ07 419 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 GMEB1Q9Y692 573 aa17.36■□□□□ 0.37
NELFE-212ENST00000492539 TRBV5-3A0A0A0MS03 114 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 CFAP73A6NFT4 308 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 LIPT2A6NK58 231 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 AQP7P3A6NL99 342 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 CCDC22O60826 627 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 GPIP06744 558 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 UQCRBP14927 111 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 PDLIM4P50479 330 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 CEACAM7Q14002 265 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 MAPRE2Q15555 327 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 HIKESHIQ53FT3 197 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 MRPL2Q5T653 305 aaKnown RBP17.35■□□□□ 0.37
NELFE-212ENST00000492539 KLHL24Q6TFL4 600 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 AAED1Q7RTV5 226 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms