RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CLEC2DQ9UHP7 191 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 GPR55Q9Y2T6 319 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 MYO18BQ8IUG5 2567 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 SVILO95425 2214 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 A0A1W2PQL4 384 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 A0A1W2PRB8 838 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CLEC18AA5D8T8 446 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 C5orf58C9J3I9 102 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 KLRC4-KLRK1H3BQV0 150 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 SEC14L5O43304 696 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 OR10H3O60404 316 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CDRT1O95170 752 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CRYABP02511 175 aaKnown RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CT45A8P0DMV1 189 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CT45A9P0DMV2 189 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 PRKCAP17252 672 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 ABCD3P28288 659 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 NTSP30990 170 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 PPICP45877 212 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 ALDH6A1Q02252 535 aaKnown RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 MXD1Q05195 221 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 ZNF91Q05481 1191 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 YIF1BQ5BJH7 314 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CT45A2Q5DJT8 189 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 DCST1Q5T197 706 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 PRAMEF20Q5VT98 475 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 LIPKQ5VXJ0 399 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CLEC18BQ6UXF7 455 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 WDR53Q7Z5U6 358 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 OR2L13Q8N349 312 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 ZFP62Q8NB50 900 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CLEC18CQ8NCF0 446 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 OR4N2Q8NGD1 307 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 ENKURQ8TC29 256 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 PAQR8Q8TEZ7 354 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 LCORQ96JN0 433 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 SGCZQ96LD1 299 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 VSTM2LQ96N03 204 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 GON7Q9BXV9 100 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 RNF121Q9H920 327 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 RANGRFQ9HD47 186 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 ABCB9Q9NP78 766 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 RPRD1BQ9NQG5 326 aaKnown RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 C19orf53Q9UNZ5 99 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 BOLA1Q9Y3E2 137 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 ESPL1Q14674 2120 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 A0A087WV62 115 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 TRBV4-1A0A0J9YWV2 114 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 B4DXG7 233 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 NPIPA5E9PKD4 350 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 FAAHO00519 579 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 SEMA7AO75326 666 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 PDE9AO76083 593 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 SOX14O95416 240 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 CSF3P09919 207 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 TSPAN19P0C672 248 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 DRD5P21918 477 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 ERP29P30040 261 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 SLC9A3P48764 834 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 HSF1Q00613 529 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 FOXO1Q12778 655 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 HNRNPA0Q13151 305 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 QPRTQ15274 297 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 OCLNQ16625 522 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 SLC22A10Q63ZE4 541 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 C12orf73Q69YU5 71 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 PEX5LQ8IYB4 626 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 FAM98AQ8NCA5 519 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 TRMT61AQ96FX7 289 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 RNF170Q96K19 258 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 KCTD7Q96MP8 289 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 TSSK6Q9BXA6 273 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 C11orf54Q9H0W9 315 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 POLR2J3Q9H1A7 115 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 PLSCR3Q9NRY6 295 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 TXNL4BQ9NX01 149 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 REV1Q9UBZ9 1251 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 PRODH2Q9UF12 536 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 NUFIP1Q9UHK0 495 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 NPIPA1Q9UND3 350 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 FRG2CA6NGY1 282 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 FFAR1O14842 300 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 TRIM3O75382 744 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 FREM3P0C091 2139 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 CPEP16870 476 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 MYL12AP19105 171 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 UQCRC2P22695 453 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 MANFP55145 182 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 SMIM11AP58511 58 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 PSG6Q00889 435 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 TIGD3Q6B0B8 471 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 PLET1Q6UQ28 207 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 TCEANCQ8N8B7 351 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 UBASH3BQ8TF42 649 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 HGDQ93099 445 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 NTNG2Q96CW9 530 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 OMA1Q96E52 524 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 GPR137Q96N19 417 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 FYTTD1Q96QD9 318 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms