RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 SOSTQ9BQB4 213 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 DNTTIP1Q9H147 329 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 CLDND1Q9NY35 253 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 PRELID3BQ9Y3B1 194 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 A0A0B4J2A0 478 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 SERTM1A2A2V5 107 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 LRIT2A6NDA9 550 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 M0R036 132 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 IMPA2O14732 288 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 B3GALNT1O75752 331 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 HOXC8P31273 242 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 PRMT2P55345 433 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 PCBP4P57723 403 aaKnown RBP9.06□□□□□ -0.96
ERCC3-208ENST00000491292 GPR85P60893 370 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 DYRK1AQ13627 763 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 RBMS2Q15434 407 aaKnown RBP9.06□□□□□ -0.96
ERCC3-208ENST00000491292 ZNHIT3Q15649 155 aaPredicted RBP9.06□□□□□ -0.96
ERCC3-208ENST00000491292 CST9Q5W186 159 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 CDH26Q8IXH8 852 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 OR7G2Q8NG99 324 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 OR4C16Q8NGL9 310 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 CMSS1Q9BQ75 279 aaKnown RBP9.06□□□□□ -0.96
ERCC3-208ENST00000491292 UPB1Q9UBR1 384 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 SHPKQ9UHJ6 478 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 MRPS23Q9Y3D9 190 aaKnown RBP9.06□□□□□ -0.96
ERCC3-208ENST00000491292 STON1Q9Y6Q2 735 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 RP1P56715 2156 aa9.06□□□□□ -0.96
ERCC3-208ENST00000491292 TNS1Q9HBL0 1735 aaKnown RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 RALGAPA2Q2PPJ7 1873 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 IFITM5A6NNB3 132 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TRIM77I1YAP6 450 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 MAN2B1O00754 1011 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 CD3DP04234 171 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 HIST1H2ABP04908 130 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 F13BP05160 661 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 GABRA1P14867 456 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 HTR2AP28223 471 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 GRK6P43250 576 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 S100A10P60903 97 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 ACTA2P62736 377 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 ACTG2P63267 376 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 EIF2B1Q14232 305 aaKnown RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 RNLSQ5VYX0 342 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 B3GNTL1Q67FW5 361 aaPredicted RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 GLT8D1Q68CQ7 371 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 DPPA4Q7L190 304 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 HIST3H2AQ7L7L0 130 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TMEM150AQ86TG1 271 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 LINC00518Q8N0U6 118 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 OR2L2Q8NH16 312 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 HIST1H2ACQ93077 130 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 FAM46BQ96A09 425 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TMEM106AQ96A25 262 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 CHST6Q9GZX3 395 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 RXFP3Q9NSD7 469 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 KCMF1Q9P0J7 381 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 DEC1Q9P2X7 70 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 CARNS1A5YM72 827 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 EPPINO95925 133 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 CYB5AP00167 134 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 PLGP00747 810 aaPredicted RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 HLA-AP01891 365 aaKnown RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TACSTD2P09758 323 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 F3P13726 295 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 CPMP14384 443 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 CTGFP29279 349 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 LSSP48449 732 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 KLF9Q13886 244 aaPredicted RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 CDK5R1Q15078 307 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 H3F3CQ6NXT2 135 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 SLC16A13Q7RTY0 426 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 IL17RCQ8NAC3 791 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 ZNF563Q8TA94 476 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 STOML3Q8TAV4 291 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 HGDQ93099 445 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 PARP12Q9H0J9 701 aaKnown RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 NIT2Q9NQR4 276 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 SLC22A11Q9NSA0 550 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TAS2R5Q9NYW4 299 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 NCDNQ9UBB6 729 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 ZNF230Q9UIE0 474 aaPredicted RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TET1Q8NFU7 2136 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3DA0A087WVF3 549 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3IA0A087WXS9 549 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3EA0A087X179 549 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3KA0A087X1G2 549 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3FA6NER0 549 aaPredicted RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 MFSD2BA6NFX1 497 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3LB9A6J9 549 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 EIF1AYO14602 144 aaKnown RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3HP0C7X1 549 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 FLI1Q01543 452 aaPredicted RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 ZNF85Q03923 595 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 PRDX1Q06830 199 aaKnown RBP9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TCEAL5Q5H9L2 206 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3GQ6DHY5 549 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3CQ6IPX1 549 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 ARHGAP11AQ6P4F7 1023 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 CD300LDQ6UXZ3 194 aa9.05□□□□□ -0.96
ERCC3-208ENST00000491292 TBC1D3Q8IZP1 549 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms