RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 POU2F1P14859 743 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 IGFBP5P24593 272 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 AGFG1P52594 562 aaKnown RBP16.69■□□□□ 0.26
MCF2L-230ENST00000491028 RPS4XP62701 263 aaKnown RBP16.69■□□□□ 0.26
MCF2L-230ENST00000491028 SF3B4Q15427 424 aaKnown RBP eCLIP16.69■□□□□ 0.266e-15■■■□□ 19
MCF2L-230ENST00000491028 TAF11Q15544 211 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 C3AR1Q16581 482 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 RPL13AP3Q6NVV1 102 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 GFRALQ6UXV0 394 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 MEX3DQ86XN8 651 aaKnown RBP16.69■□□□□ 0.26
MCF2L-230ENST00000491028 PARP8Q8N3A8 854 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 CLDN22Q8N7P3 220 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 OR13C2Q8NGS9 318 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 ZNF417Q8TAU3 575 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 FAM57AQ8TBR7 257 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 ZPLD1Q8TCW7 415 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 ZNF587Q96SQ5 575 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-230ENST00000491028 SRXN1Q9BYN0 137 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 NDEL1Q9GZM8 345 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 VCXQ9H320 206 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 SMURF2Q9HAU4 748 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 CHST11Q9NPF2 352 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 PAPOLBQ9NRJ5 636 aaKnown RBP16.69■□□□□ 0.26
MCF2L-230ENST00000491028 KRT84Q9NSB2 600 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 ENOPH1Q9UHY7 261 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 B3GALT5Q9Y2C3 310 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 AQP7P3A6NL99 342 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 AHRRA9YTQ3 701 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 SYNGR4O95473 234 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 GABRA1P14867 456 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 ABOP16442 354 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 CDH2P19022 906 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-230ENST00000491028 ENPP1P22413 925 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 PTGER4P35408 488 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 RAD23AP54725 363 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 MLLT10P55197 1068 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 PRPS1P60891 318 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 H3F3AP84243 136 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 PMS2P3Q13401 168 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 LRRC36Q1X8D7 754 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 RFX4Q33E94 735 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 ZBED5Q49AG3 693 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 KLHL17Q6TDP4 642 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 ZNF620Q6ZNG0 422 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 H1FNTQ75WM6 255 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-230ENST00000491028 SLC43A2Q8N370 569 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 LRRC17Q8N6Y2 441 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 ST6GALNAC3Q8NDV1 305 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 MAGEE2Q8TD90 523 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-230ENST00000491028 NRG4Q8WWG1 115 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 SLC29A1Q99808 456 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 TUBA1CQ9BQE3 449 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 FANCFQ9NPI8 374 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 TMEFF2Q9UIK5 374 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-230ENST00000491028 MCTS1Q9ULC4 181 aaKnown RBP16.68■□□□□ 0.26
MCF2L-230ENST00000491028 SIGLEC7Q9Y286 467 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 ZNF835Q9Y2P0 537 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 ZNF175Q9Y473 711 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 ORC6Q9Y5N6 252 aa16.68■□□□□ 0.26
MCF2L-230ENST00000491028 FIGNL2A6NMB9 653 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 WDR1O75083 606 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 AKR7A3O95154 331 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 RCBTB2O95199 551 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 TPOP07202 933 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 OSMP13725 252 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 ZNF26P17031 533 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-230ENST00000491028 UQCRC1P31930 480 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 PTDSS1P48651 473 aaKnown RBP16.67■□□□□ 0.26
MCF2L-230ENST00000491028 SNCBQ16143 134 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 GXYLT1Q4G148 440 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 ANKRD34AQ69YU3 496 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 ADGRE4PQ86SQ3 457 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 FANK1Q8TC84 345 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 ZNF845Q96IR2 970 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-230ENST00000491028 RDH12Q96NR8 316 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 PNPLA3Q9NST1 481 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 REV1Q9UBZ9 1251 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 CDH10Q9Y6N8 788 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 ATRXP46100 2492 aa16.67■□□□□ 0.26
MCF2L-230ENST00000491028 TRAV27A0A087WT01 109 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 A0A1W2PNV4 684 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 CLCA1A8K7I4 914 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 PLPP3O14495 311 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 PRRG2O14669 202 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 SMAD9O15198 467 aaKnown RBP16.66■□□□□ 0.26
MCF2L-230ENST00000491028 PTP4A3O75365 173 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 VAMP5O95183 116 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 OR6A2O95222 327 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 HOXD4P09016 255 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-230ENST00000491028 FCGR2AP12318 317 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 P2RY4P51582 365 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 PUDPQ08623 228 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 ZP4Q12836 540 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 FHL1Q13642 323 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 PON3Q15166 354 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 ABLIM2Q6H8Q1 611 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 SMARCD3Q6STE5 483 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 Q6ZPB1 254 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-230ENST00000491028 TMEM99Q8N816 258 aa16.66■□□□□ 0.26
MCF2L-230ENST00000491028 OR5M9Q8NGP3 310 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms