RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 AKR7A3O95154 331 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 NDUFA7O95182 113 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 PPIAL4FP0DN26 164 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 GLRXP35754 106 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 FRKP42685 505 aaPredicted RBP11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 CRYBB2P43320 205 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 SERPINB8P50452 374 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 GPR68Q15743 365 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 UNC50Q53HI1 259 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 OLIG3Q7RTU3 272 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 GRINAQ7Z429 371 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 KIF18AQ8NI77 898 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 ADAMTS15Q8TE58 950 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 KCNF1Q9H3M0 494 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 UBAP1Q9NZ09 502 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 RNF114Q9Y508 228 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 TMEM72A0PK05 275 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 ZC3H12DA2A288 527 aaKnown RBP11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 CLDN25C9JDP6 229 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 TRAPPC2LH3BP13 241 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 EIF3HO15372 352 aaKnown RBP eCLIP11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 TRAF3IP2O43734 574 aaPredicted RBP11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF35P13682 527 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 FKBP2P26885 142 aaKnown RBP11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 STX2P32856 288 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 CAPZA2P47755 286 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 NAB1Q13506 487 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 UAP1Q16222 522 aaPredicted RBP11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 NKPD1Q17RQ9 610 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 NIPAL3Q6P499 406 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 BHLHE22Q8NFJ8 381 aaPredicted RBP11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 PPCDCQ96CD2 204 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 SDF2Q99470 211 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 SF3B5Q9BWJ5 86 aaKnown RBP11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 ACTRT3Q9BYD9 372 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 SH3BP4Q9P0V3 963 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 SEC14L4Q9UDX3 406 aa11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF346Q9UL40 294 aaKnown RBP11.6□□□□□ -0.55
EXOSC3-207ENST00000490516 TMED7-TICAM2A0A0A6YYA0 188 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 SERTM1A2A2V5 107 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 ISPDA4D126 451 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 C17orf100A8MU93 164 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 NPIPB8E9PQR5 432 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 FOXH1O75593 365 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 FOXA1P55317 472 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 SH3BGRP55822 239 aaPredicted RBP11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 MRPS25P82663 173 aaKnown RBP11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 TP53BP2Q13625 1128 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF141Q15928 474 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 FXNQ16595 210 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 IMPG1Q17R60 797 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF678Q5SXM1 525 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 GKAP1Q5VSY0 366 aaPredicted RBP11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 CCBE1Q6UXH8 406 aaPredicted RBP11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 C9orf139Q6ZV77 190 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 USP51Q70EK9 711 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 PARP8Q8N3A8 854 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 TMEM151AQ8N4L1 468 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 FAM76AQ8TAV0 307 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 ST7LQ8TDW4 575 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 GTF3AQ92664 365 aaKnown RBP11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 RAB1CQ92928 201 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 DDIT4LQ96D03 193 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF837Q96EG3 531 aaPredicted RBP11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 TIMD4Q96H15 378 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 TSPAN32Q96QS1 320 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 MRPL57Q9BQC6 102 aaKnown RBP11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 NMUR2Q9GZQ4 415 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 TAAR3PQ9P1P4 343 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 ASH2LQ9UBL3 628 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 PCDHGB4Q9UN71 923 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 TMED7Q9Y3B3 224 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
EXOSC3-207ENST00000490516 AQP7P3A6NL99 342 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 FCMRO60667 390 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 UGT2B17O75795 530 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 CLPXO76031 633 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 ZNF432O94892 652 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 CLPTM1O96005 669 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 ENO1P06733 434 aaKnown RBP11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 CSF1P09603 554 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 ZNF12P17014 697 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 PGM1P36871 562 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 CEACAM7Q14002 265 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 OR7A5Q15622 319 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 C2orf68Q2NKX9 166 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 TRMT5Q32P41 509 aaKnown RBP11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 RUSC1-AS1Q66K80 236 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 TMEM154Q6P9G4 183 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 EMBQ6PCB8 327 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 CREB3L2Q70SY1 520 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 EIF3MQ7L2H7 374 aaKnown RBP11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 FAM71CQ8NEG0 241 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 OR52E2Q8NGJ4 325 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 OR5D16Q8NGK9 328 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 LINC01006Q8NI28 216 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 TRIM44Q96DX7 344 aaPredicted RBP11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 ZNF764Q96H86 408 aaPredicted RBP11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 TMEM237Q96Q45 408 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 MRI1Q9BV20 369 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms