RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 B3GAT1Q9P2W7 334 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 MALT1Q9UDY8 824 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 SLC13A4Q9UKG4 626 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 SLC9A8Q9Y2E8 581 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 A0A087WUJ7 227 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 CPSF4LA6NMK7 179 aaKnown RBP15.96■□□□□ 0.15
COL9A3-214ENST00000490398 M0R082 166 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 FZD7O75084 574 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 COX4I1P13073 169 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 GRPRP30550 384 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 SELENOPP49908 381 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 ACKR1Q16570 336 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 DEFB113Q30KQ7 82 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 ENTPD8Q5MY95 495 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 FAM91A1Q658Y4 838 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 ZNF704Q6ZNC4 412 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-214ENST00000490398 LINGO2Q7L985 606 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 SPATA21Q7Z572 469 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 LILRB1Q8NHL6 650 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-214ENST00000490398 ZNF417Q8TAU3 575 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 DNAJA4Q8WW22 397 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-214ENST00000490398 HSD17B8Q92506 261 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 NEUROG1Q92886 237 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 TMEM45BQ96B21 275 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 MBD6Q96DN6 1003 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 SLC47A1Q96FL8 570 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 ZNF587Q96SQ5 575 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-214ENST00000490398 SF3B5Q9BWJ5 86 aaKnown RBP15.96■□□□□ 0.15
COL9A3-214ENST00000490398 FAM107BQ9H098 131 aa15.96■□□□□ 0.15
COL9A3-214ENST00000490398 ROS1P08922 2347 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 TRAV36DV7A0A075B6V5 113 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 DPRXA6NFQ7 191 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 AIM2O14862 343 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 SLC22A2O15244 555 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 CNOT4O95628 575 aaKnown RBP15.95■□□□□ 0.14
COL9A3-214ENST00000490398 BGLAPP02818 100 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 C8BP07358 591 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 GGT1P19440 569 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 NCALDP61601 193 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 GABRA6Q16445 453 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 TMEM225Q6GV28 225 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 LINC00114Q6XXX2 140 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 AAED1Q7RTV5 226 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 KRTAP1-3Q8IUG1 177 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 WDFY1Q8IWB7 410 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 SLC30A8Q8IWU4 369 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 BHLHE22Q8NFJ8 381 aaPredicted RBP15.95■□□□□ 0.14
COL9A3-214ENST00000490398 RP9Q8TA86 221 aaKnown RBP15.95■□□□□ 0.14
COL9A3-214ENST00000490398 MOGAT1Q96PD6 335 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 SH3GL1Q99961 368 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 MYLK2Q9H1R3 596 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 MRGBPQ9NV56 204 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 ASB6Q9NWX5 421 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 ZFHX3Q15911 3703 aa15.95■□□□□ 0.14
COL9A3-214ENST00000490398 OR5H1A6NKK0 313 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 SHOX2O60902 331 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-214ENST00000490398 HPRP00739 348 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 NPPAP01160 153 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 SLC25A3Q00325 362 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 PPA1Q15181 289 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 NCMAPQ5T1S8 102 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 RANBP3LQ86VV4 465 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-214ENST00000490398 SLC15A3Q8IY34 581 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 PCYOX1LQ8NBM8 494 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 OR52N5Q8NH56 324 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 PARPBPQ9NWS1 579 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 GID8Q9NWU2 228 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 RASD1Q9Y272 281 aa15.94■□□□□ 0.14
COL9A3-214ENST00000490398 CIB4A0PJX0 185 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 FAM220BPB1ANY3 271 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 MS4A18H0YCH9 400 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 FMO6PO60774 539 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 CCDC22O60826 627 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 UPK3AO75631 287 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 HLA-DOBP13765 273 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 LSP1P33241 339 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 BSPH1Q075Z2 132 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 VEZF1Q14119 521 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 MS4A18Q3C1V0 323 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 TIMM23BQ5SRD1 257 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 FAM69AQ5T7M9 428 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 INTS11Q5TA45 600 aaKnown RBP15.93■□□□□ 0.14
COL9A3-214ENST00000490398 C8orf82Q6P1X6 216 aaPredicted RBP15.93■□□□□ 0.14
COL9A3-214ENST00000490398 NIPAL3Q6P499 406 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 WDR31Q8NA23 367 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 SLC26A7Q8TE54 656 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 IGFBPL1Q8WX77 278 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 MUS81Q96NY9 551 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 ALPK1Q96QP1 1244 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 TAS2R16Q9NYV7 291 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 UPB1Q9UBR1 384 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 SH3GLB1Q9Y371 365 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 SLC25A15Q9Y619 301 aa15.93■□□□□ 0.14
COL9A3-214ENST00000490398 RAI1Q7Z5J4 1906 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-214ENST00000490398 NME4O00746 187 aa15.92■□□□□ 0.14
COL9A3-214ENST00000490398 CLOCKO15516 846 aa15.92■□□□□ 0.14
COL9A3-214ENST00000490398 SNX3O60493 162 aa15.92■□□□□ 0.14
COL9A3-214ENST00000490398 VAMP5O95183 116 aa15.92■□□□□ 0.14
COL9A3-214ENST00000490398 FUT4P22083 530 aa15.92■□□□□ 0.14
COL9A3-214ENST00000490398 NR1H2P55055 460 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms