RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 C1orf232A0A0U1RR37 186 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SMIM35A0A1B0GVV1 85 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CCDC182A6NF36 153 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 A8MU76 341 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 I3L4J1 428 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NUAK1O60285 661 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CLDN9O95484 217 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CST4P01036 141 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 GNSP15586 552 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF3P17036 446 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PSMC3P17980 439 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 MSH3P20585 1137 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CXCR2P25025 360 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 GIFP27352 417 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NUDT1P36639 197 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 GPR4P46093 362 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 RAP1GAPP47736 663 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 EWSR1Q01844 656 aaKnown RBP eCLIP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 RAD51Q06609 339 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CD300CQ08708 224 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PJVKQ0ZLH3 352 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF846Q147U1 533 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TGIF1Q15583 401 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TRIP13Q15645 432 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 GGTA1PQ4G0N0 100 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SPANXN4Q5MJ08 99 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TRMT10CQ7L0Y3 403 aaKnown RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 AMIGO2Q86SJ2 522 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NFE4Q86UQ8 179 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CARM1Q86X55 608 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TBC1D10CQ8IV04 446 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 DSELQ8IZU8 1212 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 Q8N9G6 341 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PRSS33Q8NF86 280 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 OR51G2Q8NGK0 314 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ADAMTS16Q8TE57 1224 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 C10orf82Q8WW14 230 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 UPRTQ96BW1 309 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 B3GALT6Q96L58 329 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 DEFB118Q96PH6 123 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 MBOAT4Q96T53 435 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 C1orf50Q9BV19 199 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 BOLA2Q9H3K6 86 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 RHOJQ9H4E5 214 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ANKRA2Q9H9E1 313 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 HMG20AQ9NP66 347 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NT5MQ9NPB1 228 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PRSS16Q9NQE7 514 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SIX4Q9UIU6 781 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 IKZF3Q9UKT9 509 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NUP50Q9UKX7 468 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PACSIN2Q9UNF0 486 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 DENND4AQ7Z401 1863 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 MGAMO43451 1857 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SIP14410 1827 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ANHXE9PGG2 379 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 EDF1O60869 148 aaKnown RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SULT1C4O75897 302 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ALDOBP05062 364 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 FGF1P05230 155 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SNRPAP09012 282 aaKnown RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 THRAP10827 490 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 MYOD1P15172 320 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CD1CP29017 333 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TIMP3P35625 211 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SPAM1P38567 509 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 BTDP43251 543 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NR4A2P43354 598 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NKX2-5P52952 324 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 KDSRQ06136 332 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 RAB40BQ12829 278 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 APOFQ13790 326 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TFDP1Q14186 410 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 C3AR1Q16581 482 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 HIKESHIQ53FT3 197 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 BEX5Q5H9J7 111 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 EOGTQ5NDL2 527 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PXDC1Q5TGL8 231 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF658Q5TYW1 1059 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PRAMEF17Q5VTA0 474 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NANOGP8Q6NSW7 305 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CGB2Q6NT52 195 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 BHLHB9Q6PI77 547 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF788Q6ZQV5 615 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CATSPER3Q86XQ3 398 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SYCE1Q8N0S2 351 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 FGFRL1Q8N441 504 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TTLQ8NG68 377 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 OR5M9Q8NGP3 310 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PYDC1Q8WXC3 89 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 FCGR1BQ92637 280 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 RPL3LQ92901 407 aaKnown RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 DUS3LQ96G46 650 aaKnown RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 DCUN1D1Q96GG9 259 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TOX2Q96NM4 488 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CHID1Q9BWS9 393 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 DCLK3Q9C098 648 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF302Q9NR11 478 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms