RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 FBXL4Q9UKA2 621 aa8.73□□□□□ -1.01
RAB3GAP1-205ENST00000489858 HIF3AQ9Y2N7 669 aa8.73□□□□□ -1.01
RAB3GAP1-205ENST00000489858 TMEM184BQ9Y519 407 aaPredicted RBP8.73□□□□□ -1.01
RAB3GAP1-205ENST00000489858 CLCA3PQ9Y6N3 262 aa8.73□□□□□ -1.01
RAB3GAP1-205ENST00000489858 MAU2Q9Y6X3 613 aa8.73□□□□□ -1.01
RAB3GAP1-205ENST00000489858 THADAQ6YHU6 1953 aa8.73□□□□□ -1.01
RAB3GAP1-205ENST00000489858 IGHV1OR21-1A0A087WYE8 117 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 IGKV3D-11A0A0A0MRZ8 115 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 TRAV1-2A0A0B4J238 106 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 A0A1W2PRG6 482 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 MEIOCA2RUB1 952 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 OR2W5A6NFC9 320 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 TMEM221A6NGB7 291 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 ANKRD61A6NGH8 418 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 HMX3A6NHT5 357 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 A8MUA0 341 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 B4DXG7 233 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 LRRN3E7EW58 273 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 HYAL3O43820 417 aaPredicted RBP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 GPRIN2O60269 458 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 GATBO75879 557 aaKnown RBP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 GLCEO94923 617 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 DDAH2O95865 285 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 CD14P08571 375 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 EDNRAP25101 427 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 SHC1P29353 583 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 PYCR1P32322 319 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 ACVR1BP36896 505 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 DDOSTP39656 456 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 OR1D4P47884 311 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 OR1D5P58170 312 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 ERVK-25P63136 954 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 CSTF1Q05048 431 aaKnown RBP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 KCNAB1Q14722 419 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 CD226Q15762 336 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 SMAD2Q15796 467 aaKnown RBP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 ZNF74Q16587 644 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 CCDC58Q4VC31 144 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 ACSM3Q53FZ2 586 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 ARHGAP40Q5TG30 622 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 HACD4Q5VWC8 232 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 LEG1Q6P5S2 330 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 BAIAP2L2Q6UXY1 529 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 SSX6Q7RTT6 188 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 PRSS42Q7Z5A4 293 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 NANOGNBQ7Z5D8 188 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 PXKQ7Z7A4 578 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 LSRQ86X29 649 aaPredicted RBP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 KMT5CQ86Y97 462 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 D2HGDHQ8N465 521 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 LRRC17Q8N6Y2 441 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 SCAIQ8N9R8 606 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 LSM14AQ8ND56 463 aaKnown RBP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 NPEPL1Q8NDH3 523 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 OR6K6Q8NGW6 343 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 MOSPD2Q8NHP6 518 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 HAVCR2Q8TDQ0 301 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 LIPHQ8WWY8 451 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 PHYHIPQ92561 330 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 DAZLQ92904 295 aaKnown RBP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 TSLPQ969D9 159 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 ITFG2Q969R8 447 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 RASD2Q96D21 266 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 CLIP3Q96DZ5 547 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 SMIM19Q96E16 107 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 PELI1Q96FA3 418 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 PGLYRP3Q96LB9 341 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 FRMD6Q96NE9 622 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 GAL3ST4Q96RP7 486 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 LMF1Q96S06 567 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 NMNAT2Q9BZQ4 307 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 FOXQ1Q9C009 403 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 MMP28Q9H239 520 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 TTYH1Q9H313 450 aaPredicted RBP8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 LRRN3Q9H3W5 708 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 RNF121Q9H920 327 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 MARCH7Q9H992 704 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 KLHL1Q9NR64 748 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 CYSLTR2Q9NS75 346 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 NCDNQ9UBB6 729 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 COPS7AQ9UBW8 275 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 GNG8Q9UK08 70 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 ADAM18Q9Y3Q7 739 aa8.72□□□□□ -1.01
RAB3GAP1-205ENST00000489858 REV3LO60673 3130 aa8.71□□□□□ -1.01
RAB3GAP1-205ENST00000489858 TEX13CA0A0J9YWL9 993 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 TCRBV16S1A1N1A0A5B0 115 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 OR6C76A6NM76 312 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 ZNF879B4DU55 563 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 DVL2O14641 736 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 TFECO14948 347 aaPredicted RBP8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 PLA2G10O15496 165 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 FLRT2O43155 660 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 LYRM1O43325 122 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 NUDT21O43809 227 aaKnown RBP8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 EIF4E2O60573 245 aaKnown RBP8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 SELENOFO60613 162 aa8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 CPNE3O75131 537 aaKnown RBP8.71□□□□□ -1.02
RAB3GAP1-205ENST00000489858 TRIM3O75382 744 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms