RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 ERFP50548 548 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 LSM11P83369 360 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-F-229ENST00000489502 ST3GAL3Q11203 375 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 SNTB1Q13884 538 aaKnown RBP12.81□□□□□ -0.36
HLA-F-229ENST00000489502 MTX3Q5HYI7 312 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 GTF2IRD2BQ6EKJ0 949 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 PGM2L1Q6PCE3 622 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 CCDC121Q6ZUS5 278 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 GPAT4Q86UL3 456 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 GTF2IRD2Q86UP8 949 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 CYP4Z1Q86W10 505 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 MEX3DQ86XN8 651 aaKnown RBP12.81□□□□□ -0.36
HLA-F-229ENST00000489502 TMEM239Q8WW34 195 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 FNDC11Q9BVV2 318 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 LRMDAQ9H2I8 198 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 BCO1Q9HAY6 547 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 CHST11Q9NPF2 352 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 GALNT8Q9NY28 637 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 JKAMPQ9P055 326 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 EMC3Q9P0I2 261 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 CENPEQ02224 2701 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 IGKV3D-15A0A087WSY6 115 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 ACOT8O14734 319 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 OR2T1O43869 369 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 ATP5HO75947 161 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 CH25HO95992 272 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 YES1P07947 543 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 THRBP10828 461 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 CD8BP10966 210 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 IFNA8P32881 189 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 RBM34P42696 430 aaKnown RBP12.8□□□□□ -0.36
HLA-F-229ENST00000489502 SLC16A1P53985 500 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 IL1RL1Q01638 556 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 FLOT2Q14254 428 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF74Q16587 644 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 EXOC3L2Q2M3D2 409 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 IQCCQ4KMZ1 466 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 FGD3Q5JSP0 725 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF474Q6S9Z5 364 aaPredicted RBP12.8□□□□□ -0.36
HLA-F-229ENST00000489502 TFAP2EQ6VUC0 442 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 SLC46A3Q7Z3Q1 461 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 KDM8Q8N371 416 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF610Q8N9Z0 462 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 OR9K2Q8NGE7 335 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 LRGUKQ96M69 825 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 TACO1Q9BSH4 297 aaKnown RBP12.8□□□□□ -0.36
HLA-F-229ENST00000489502 RBM24Q9BX46 236 aaKnown RBP12.8□□□□□ -0.36
HLA-F-229ENST00000489502 GP6Q9HCN6 339 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 C20orf141Q9NUB4 165 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.8□□□□□ -0.36
HLA-F-229ENST00000489502 SLC7A8Q9UHI5 535 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 FAM32AQ9Y421 112 aaKnown RBP12.8□□□□□ -0.36
HLA-F-229ENST00000489502 TESMINQ9Y4I5 508 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 FLVCR1Q9Y5Y0 555 aa12.8□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF724A8MTY0 619 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 A8MXE2 369 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 MSTNO14793 375 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 STAMBPO95630 424 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 HPRP00739 348 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 FABP3P05413 133 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 H1F0P07305 194 aaKnown RBP12.79□□□□□ -0.36
HLA-F-229ENST00000489502 UMPSP11172 480 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 NQO1P15559 274 aaKnown RBP12.79□□□□□ -0.36
HLA-F-229ENST00000489502 RHCEP18577 417 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 CCKARP32238 428 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 RASSF2P50749 326 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 SPIBQ01892 262 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 TRAM2Q15035 370 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 PDK3Q15120 406 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 FBXL19-AS1Q494R0 122 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 EEF1A1P5Q5VTE0 462 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 CASP12Q6UXS9 341 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 GALNT5Q7Z7M9 940 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 ZDHHC21Q8IVQ6 265 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 LRRC17Q8N6Y2 441 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 PIK3C3Q8NEB9 887 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 OR6S1Q8NH40 331 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 RNASE6Q93091 150 aaKnown RBP12.79□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF385AQ96PM9 386 aaKnown RBP12.79□□□□□ -0.36
HLA-F-229ENST00000489502 PIP5K1AQ99755 562 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 ASPNQ9BXN1 380 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 SLC19A3Q9BZV2 496 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 TRIM15Q9C019 465 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 NMNAT1Q9HAN9 279 aaPredicted RBP12.79□□□□□ -0.36
HLA-F-229ENST00000489502 B3GAT1Q9P2W7 334 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 PRSS50Q9UI38 385 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 POMPQ9Y244 141 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 NOSIPQ9Y314 301 aaKnown RBP12.79□□□□□ -0.36
HLA-F-229ENST00000489502 MED31Q9Y3C7 131 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 UNC79Q9P2D8 2635 aa12.79□□□□□ -0.36
HLA-F-229ENST00000489502 CRYBG3Q68DQ2 2970 aa12.78□□□□□ -0.36
HLA-F-229ENST00000489502 SETXQ7Z333 2677 aaKnown RBP12.78□□□□□ -0.36
HLA-F-229ENST00000489502 EBAG9O00559 213 aa12.78□□□□□ -0.36
HLA-F-229ENST00000489502 SERPINI2O75830 405 aa12.78□□□□□ -0.36
HLA-F-229ENST00000489502 MT-ATP6P00846 226 aa12.78□□□□□ -0.36
HLA-F-229ENST00000489502 IGHV3-9P01782 118 aa12.78□□□□□ -0.36
HLA-F-229ENST00000489502 FUT1P19526 365 aa12.78□□□□□ -0.36
HLA-F-229ENST00000489502 NTF4P34130 210 aa12.78□□□□□ -0.36
HLA-F-229ENST00000489502 TRAP1Q12931 704 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms