RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 AAED1Q7RTV5 226 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 MAVSQ7Z434 540 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 MYPOPQ86VE0 399 aaPredicted RBP10.24□□□□□ -0.77
ACTN4-206ENST00000489451 EPHX4Q8IUS5 362 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 CLIP4Q8N3C7 705 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 PMM1Q92871 262 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 VPS33AQ96AX1 596 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 ALKBH3Q96Q83 286 aaPredicted RBP10.24□□□□□ -0.77
ACTN4-206ENST00000489451 OR52B2Q96RD2 323 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 NAA11Q9BSU3 229 aaPredicted RBP10.24□□□□□ -0.77
ACTN4-206ENST00000489451 PTDSS2Q9BVG9 487 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 SF3B5Q9BWJ5 86 aaKnown RBP10.24□□□□□ -0.77
ACTN4-206ENST00000489451 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 MTHFD2LQ9H903 347 aaPredicted RBP10.24□□□□□ -0.77
ACTN4-206ENST00000489451 TCF7L2Q9NQB0 619 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 TMEM160Q9NX00 188 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 UPB1Q9UBR1 384 aa10.24□□□□□ -0.77
ACTN4-206ENST00000489451 IGHV4-61A0A0C4DH41 118 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 ZNF503-AS2A6NEH8 195 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 TMEM229AB2RXF0 380 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 FTCDNL1E5RQL4 147 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 NR5A2O00482 541 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 FZD7O75084 574 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 UPK3AO75631 287 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 LGI1O95970 557 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 GPIP06744 558 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 DBIP07108 87 aaKnown RBP10.23□□□□□ -0.77
ACTN4-206ENST00000489451 IGFBP1P08833 259 aaPredicted RBP10.23□□□□□ -0.77
ACTN4-206ENST00000489451 NR2F1P10589 423 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 ETFAP13804 333 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 IL7RP16871 459 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 CDH2P19022 906 aaPredicted RBP10.23□□□□□ -0.77
ACTN4-206ENST00000489451 CALCRP30988 508 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 POLR2JP52435 117 aaKnown RBP10.23□□□□□ -0.77
ACTN4-206ENST00000489451 TUBA1BP68363 451 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 TUBA4AP68366 448 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 TBRG1Q3YBR2 411 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 MSANTD1Q6ZTZ1 278 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 IL17RELQ6ZVW7 336 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 CREB3L2Q70SY1 520 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 TUBA1AQ71U36 451 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 SERPINA11Q86U17 422 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 COMTD1Q86VU5 262 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 OR1K1Q8NGR3 316 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 PROX1Q92786 737 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 FBXO17Q96EF6 278 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 AURKBQ96GD4 344 aaPredicted RBP10.23□□□□□ -0.77
ACTN4-206ENST00000489451 ITCHQ96J02 903 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 SOX7Q9BT81 388 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 SLCO1B3Q9NPD5 702 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 PARPBPQ9NWS1 579 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 CRNNQ9UBG3 495 aaPredicted RBP10.23□□□□□ -0.77
ACTN4-206ENST00000489451 SEC14L4Q9UDX3 406 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 CDC42EP3Q9UKI2 254 aa10.23□□□□□ -0.77
ACTN4-206ENST00000489451 ZNF443Q9Y2A4 671 aaPredicted RBP10.23□□□□□ -0.77
ACTN4-206ENST00000489451 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.22□□□□□ -0.772e-7■■■□□ 15.8
ACTN4-206ENST00000489451 TMEM247A6NEH6 219 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 IGLV1-44P01699 117 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 BCHEP06276 602 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 CELA3BP08861 270 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 NUDT7P0C024 238 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 TFPTP0C1Z6 253 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 HOXB9P17482 250 aaPredicted RBP10.22□□□□□ -0.77
ACTN4-206ENST00000489451 USF1P22415 310 aaPredicted RBP10.22□□□□□ -0.77
ACTN4-206ENST00000489451 IDH3AP50213 366 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 MAP2K6P52564 334 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 AQP5P55064 265 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 PRPS1P60891 318 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 EGR4Q05215 589 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 GNA13Q14344 377 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 C6orf10Q5SRN2 563 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 RNF220Q5VTB9 566 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 CYB5R2Q6BCY4 276 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 GPAT4Q86UL3 456 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 DEPDC4Q8N2C3 294 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 ANKS4BQ8N8V4 417 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 OR9I1Q8NGQ6 314 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 OR52P1PQ8NH57 321 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 SLC38A5Q8WUX1 472 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 BCL2L2Q92843 193 aaPredicted RBP10.22□□□□□ -0.77
ACTN4-206ENST00000489451 C3orf49Q96BT1 292 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 MAGEB18Q96M61 343 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 SLC38A2Q96QD8 506 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 CCDC28BQ9BUN5 200 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 C19orf24Q9BVV8 132 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 FKRPQ9H9S5 495 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 CA10Q9NS85 328 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 ADPRHL2Q9NX46 363 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 THUMPD1Q9NXG2 353 aaKnown RBP10.22□□□□□ -0.77
ACTN4-206ENST00000489451 B3GAT1Q9P2W7 334 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 MEGF8Q7Z7M0 2845 aa10.22□□□□□ -0.77
ACTN4-206ENST00000489451 ARPC4-TTLL3A0A0A6YYG9 625 aa10.21□□□□□ -0.77
ACTN4-206ENST00000489451 ZNF432O94892 652 aa10.21□□□□□ -0.77
ACTN4-206ENST00000489451 CSF3P09919 207 aa10.21□□□□□ -0.77
ACTN4-206ENST00000489451 CECR9P0C854 216 aa10.21□□□□□ -0.77
ACTN4-206ENST00000489451 ZCCHC18P0CG32 403 aa10.21□□□□□ -0.77
ACTN4-206ENST00000489451 NR4A2P43354 598 aa10.21□□□□□ -0.77
ACTN4-206ENST00000489451 LSM11P83369 360 aaKnown RBP eCLIP10.21□□□□□ -0.77
ACTN4-206ENST00000489451 HOXC5Q00444 222 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms