RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 OR9A1PQ8NGU1 263 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 OR56A3Q8NH54 315 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 DUS3LQ96G46 650 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 ITCHQ96J02 903 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 ADGRG7Q96K78 797 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 TEX37Q96LM6 180 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 OR52E6Q96RD3 313 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 PRPF18Q99633 342 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 CGREF1Q99674 301 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 HAUS8Q9BT25 410 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 EFCAB11Q9BUY7 163 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 THUMPD3Q9BV44 507 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 ACPTQ9BZG2 426 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 PCDHAC1Q9H158 963 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 CCDC177Q9NQR7 707 aaPredicted RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 C8orf4Q9NR00 106 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 FARSBQ9NSD9 589 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 TMEM184CQ9NVA4 438 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 CCL27Q9Y4X3 112 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 RNF213Q63HN8 5207 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 MYOCOSA0A1B0GUC4 107 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 OR5H1A6NKK0 313 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 SHISA8B8ZZ34 492 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 ATP6V1G2-DDX39BF2Z307 99 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 H0YIV9 168 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 H0YJX3 145 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 M0R1B8 84 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 ANKRD28O15084 1053 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 ARPC2O15144 300 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 NDUFS4O43181 175 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 IFNW1P05000 195 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 IGFBP1P08833 259 aaPredicted RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 UQCRBP14927 111 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 FASP25445 335 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 IMPA1P29218 277 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 IL12AP29459 219 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 HOXD3P31249 432 aaPredicted RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 HPCAL1P37235 193 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 RPL3P39023 403 aaKnown RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 GSK3BP49841 420 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 CLDN20P56880 219 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 RPP38P78345 283 aaKnown RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 LRRC74AQ0VAA2 488 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 DDX39BQ13838 428 aaKnown RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 BLMHQ13867 455 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 ARHGAP19Q14CB8 494 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 CYP51A1Q16850 503 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 PGS1Q32NB8 556 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 FAM98BQ52LJ0 330 aaKnown RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 PAGE3Q5JUK9 113 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 ELFN2Q5R3F8 820 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 FAM219BQ5XKK7 198 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 NANOGP8Q6NSW7 305 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 TMPRSS11BQ86T26 416 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 GPR180Q86V85 440 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 WDFY1Q8IWB7 410 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 KRT78Q8N1N4 520 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 C11orf44Q8N8P7 122 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 VPS37AQ8NEZ2 397 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 UTP15Q8TED0 518 aaKnown RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 TESCQ96BS2 214 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 NSMCE2Q96MF7 247 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 GAL3ST4Q96RP7 486 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 PCBD2Q9H0N5 130 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 EHD1Q9H4M9 534 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 NANOGQ9H9S0 305 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 EDA2RQ9HAV5 297 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 GALNT9Q9HCQ5 603 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 ARMC1Q9NVT9 282 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 CMTM6Q9NX76 183 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 SEC14L4Q9UDX3 406 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 EGFL7Q9UHF1 273 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 KCNG2Q9UJ96 466 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 RIMS3Q9UJD0 308 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 FBXL2Q9UKC9 423 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 RAB26Q9ULW5 256 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 AURKCQ9UQB9 309 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 LSM4Q9Y4Z0 139 aaKnown RBP6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 SLC25A15Q9Y619 301 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
EXOSC3-206ENST00000489414 PPIAL4EA0A075B759 164 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 A0A096LPI6 279 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 PPIAL4CA0A0B4J2A2 164 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 GNG14A0A1W2PPG7 69 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 EVPLLA8MZ36 301 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 ZNF814B7Z6K7 855 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 PPIAL4DF5H284 164 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 ICOSLGO75144 302 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 C1GALT1C1LP0DN25 315 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 PPIAL4FP0DN26 164 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 IGHV4-38-2P0DP08 117 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 COX7A2P14406 83 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 EPORP19235 508 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 GGT1P19440 569 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 ATP6V1B2P21281 511 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 ACHEP22303 614 aa6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 TCEA1P23193 301 aaKnown RBP6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 PPIBP23284 216 aaKnown RBP6.36□□□□□ -1.39
EXOSC3-206ENST00000489414 HRH2P25021 359 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms