RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 GKN3PP0CG01 181 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 ZNF23P17027 643 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 NCF2P19878 526 aaPredicted RBP8.15□□□□□ -1.1
SNX17-207ENST00000489402 GTF2E2P29084 291 aaKnown RBP8.15□□□□□ -1.1
SNX17-207ENST00000489402 SLC1A6P48664 564 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 PPOXP50336 477 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 SH3BGRP55822 239 aaPredicted RBP8.15□□□□□ -1.1
SNX17-207ENST00000489402 NME5P56597 212 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 NAAAQ02083 359 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 EFNB3Q15768 340 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 C3orf36Q3SXR2 165 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 PRAMEF8Q5VWM4 474 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 PRAMEF7Q5VXH5 474 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 OGFOD2Q6N063 350 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 NIPAL3Q6P499 406 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 ANKRD16Q6P6B7 361 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 ZIC4Q8N9L1 334 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 OR4F15Q8NGB8 312 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 OR52P1PQ8NH57 321 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 PNPT1Q8TCS8 783 aaKnown RBP8.15□□□□□ -1.1
SNX17-207ENST00000489402 OR52E6Q96RD3 313 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 ZBTB18Q99592 522 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 BPESC1Q9GZL8 116 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 ARMC7Q9H6L4 198 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 MEAF6Q9HAF1 191 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 RLIMQ9NVW2 624 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 CALML5Q9NZT1 146 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 P2RX2Q9UBL9 471 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 RASD1Q9Y272 281 aa8.15□□□□□ -1.1
SNX17-207ENST00000489402 NBEAL1Q6ZS30 2694 aa8.15□□□□□ -1.11
SNX17-207ENST00000489402 CDHR4A6H8M9 788 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 TMEM247A6NEH6 219 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 TM9SF1O15321 606 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 AHSA1O95433 338 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 BCHEP06276 602 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 GSNP06396 782 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 PGRP06401 933 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 CECR9P0C854 216 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 SELENOPP49908 381 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 IDH3GP51553 393 aaPredicted RBP8.14□□□□□ -1.11
SNX17-207ENST00000489402 CHN2P52757 468 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 CRISP3P54108 245 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 UFM1P61960 85 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 ROR2Q01974 943 aaKnown RBP8.14□□□□□ -1.11
SNX17-207ENST00000489402 LGALS3BPQ08380 585 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 BNIP2Q12982 314 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 LARS2Q15031 903 aaKnown RBP8.14□□□□□ -1.11
SNX17-207ENST00000489402 ADIPOQQ15848 244 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 ZSWIM7Q19AV6 140 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 CR1LQ2VPA4 569 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 KRT71Q3SY84 523 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 COX20Q5RI15 118 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 C1orf140Q5VVS0 124 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 ZNF836Q6ZNA1 936 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 CREB3L2Q70SY1 520 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 VRK2Q86Y07 508 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 MAGEE2Q8TD90 523 aaPredicted RBP8.14□□□□□ -1.11
SNX17-207ENST00000489402 NEU4Q8WWR8 484 aaPredicted RBP8.14□□□□□ -1.11
SNX17-207ENST00000489402 BCL2L2Q92843 193 aaPredicted RBP8.14□□□□□ -1.11
SNX17-207ENST00000489402 TEX37Q96LM6 180 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 LINC00470Q9BZP3 86 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 PLK3Q9H4B4 646 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 DYNLRB1Q9NP97 96 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 CRNNQ9UBG3 495 aaPredicted RBP8.14□□□□□ -1.11
SNX17-207ENST00000489402 PCDHB14Q9Y5E9 798 aa8.14□□□□□ -1.11
SNX17-207ENST00000489402 DSPPQ9NZW4 1301 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 A0A096LPE4 126 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 A0A1W2PPZ6 126 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 hCG_2039718K7EN88 272 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 NR5A2O00482 541 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 RFXANKO14593 260 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 RGS16O15492 202 aaPredicted RBP8.13□□□□□ -1.11
SNX17-207ENST00000489402 UPK3AO75631 287 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 ANP32DO95626 131 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 STAMBPO95630 424 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 ALDOCP09972 364 aaKnown RBP8.13□□□□□ -1.11
SNX17-207ENST00000489402 TFPTP0C1Z6 253 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 DAOP14920 347 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 ZNF43P17038 809 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 NPR2P20594 1047 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 GIFP27352 417 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 SRP14P37108 136 aaKnown RBP8.13□□□□□ -1.11
SNX17-207ENST00000489402 ACAA2P42765 397 aaKnown RBP8.13□□□□□ -1.11
SNX17-207ENST00000489402 CDKN2CP42773 168 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 CRATP43155 626 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 CLDN17P56750 224 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 VSNL1P62760 191 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 TUBA1BP68363 451 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 TUBA4AP68366 448 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 STX3Q13277 289 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 MAPK11Q15759 364 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 RNF220Q5VTB9 566 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 ATG16L1Q676U5 607 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 TUBA1AQ71U36 451 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 GPR137CQ8N3F9 429 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 RFLNBQ8N5W9 214 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 FAM169BQ8N8A8 192 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 GLB1L3Q8NCI6 653 aaPredicted RBP8.13□□□□□ -1.11
SNX17-207ENST00000489402 NUP37Q8NFH4 326 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 MFSD8Q8NHS3 518 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms