RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 NIPBLQ6KC79 2804 aaeCLIP12.31□□□□□ -0.44
VTI1A-206ENST00000489142 IGKV1D-42A0A075B6H8 117 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 M0R3H8 397 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 TPST2O60704 377 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 GTF2E2P29084 291 aaKnown RBP12.3□□□□□ -0.44
VTI1A-206ENST00000489142 RGS8P57771 180 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-206ENST00000489142 NCALDP61601 193 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 HIKESHIQ53FT3 197 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 ALG10BQ5I7T1 473 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 NIPAL3Q6P499 406 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 CLEC9AQ6UXN8 241 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 CREB3L2Q70SY1 520 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 LINGO2Q7L985 606 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 BIVMQ86UB2 503 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 P2RY8Q86VZ1 359 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 ARMC8Q8IUR7 673 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 EPHX4Q8IUS5 362 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 HIPK4Q8NE63 616 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 STK35Q8TDR2 534 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 TAAR8Q969N4 342 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 GTPBP3Q969Y2 492 aaKnown RBP12.3□□□□□ -0.44
VTI1A-206ENST00000489142 ANKRD27Q96NW4 1050 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 MUS81Q96NY9 551 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-206ENST00000489142 ZNF607Q96SK3 696 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 CGREF1Q99674 301 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 SPATA5L1Q9BVQ7 753 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 ZNF701Q9NV72 531 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-206ENST00000489142 TMEM45AQ9NWC5 275 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 ANGPT4Q9Y264 503 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 GMEB1Q9Y692 573 aa12.3□□□□□ -0.44
VTI1A-206ENST00000489142 M0R082 166 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 FBP2O00757 339 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 UPK3AO75631 287 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 KRT33AO76009 404 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 LY6G6DO95868 133 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 LGI1O95970 557 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 CD8AP01732 235 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 HOXB4P17483 251 aaPredicted RBP12.29□□□□□ -0.44
VTI1A-206ENST00000489142 CD40P25942 277 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 CLDN17P56750 224 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 IRX1P78414 480 aaPredicted RBP12.29□□□□□ -0.44
VTI1A-206ENST00000489142 IL1RL1Q01638 556 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 OR1Q1Q15612 314 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 OR7E24Q6IFN5 339 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 CGB2Q6NT52 195 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 SLC22A25Q6T423 547 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 C6orf89Q6UWU4 347 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 PRSS57Q6UWY2 283 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 DPP10Q8N608 796 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 MFSD8Q8NHS3 518 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 ZNF417Q8TAU3 575 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 STON2Q8WXE9 905 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 SLC35B4Q969S0 331 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 POM121Q96HA1 1249 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 COX4I2Q96KJ9 171 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 ZNF587Q96SQ5 575 aaPredicted RBP12.29□□□□□ -0.44
VTI1A-206ENST00000489142 SLC17A5Q9NRA2 495 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 FGFR1OP2Q9NVK5 253 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 SLC13A4Q9UKG4 626 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 POU2F3Q9UKI9 436 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 ZANQ9Y493 2812 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 PLCE1Q9P212 2302 aa12.29□□□□□ -0.44
VTI1A-206ENST00000489142 PRORSD1PA6NEY8 169 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 E7EQL1 145 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 OVOL3O00110 214 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 NDUFS7O75251 213 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 SERPINB7O75635 380 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 MFN2O95140 757 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 PAX1P15863 534 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 MPGP29372 298 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 GRPRP30550 384 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 TUBA1BP68363 451 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 TUBA4AP68366 448 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 LTBQ06643 244 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 DUSP7Q16829 419 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 KLHL17Q6TDP4 642 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 TMEM108Q6UXF1 575 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 TUBA1AQ71U36 451 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 LSMEM1Q8N8F7 131 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 POMGNT2Q8NAT1 580 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 C11orf65Q8NCR3 313 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 MAPK1IP1LQ8NDC0 245 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 GPR32P1Q8NGA4 272 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 OR10A6Q8NH74 314 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 VANGL1Q8TAA9 524 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-206ENST00000489142 SLC38A4Q969I6 547 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 AMBRA1Q9C0C7 1298 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 KLHL14Q9P2G3 628 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 B3GAT1Q9P2W7 334 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 TESQ9UGI8 421 aaKnown RBP12.28□□□□□ -0.44
VTI1A-206ENST00000489142 GDF2Q9UK05 429 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-206ENST00000489142 RASD1Q9Y272 281 aa12.28□□□□□ -0.44
VTI1A-206ENST00000489142 TRAV36DV7A0A075B6V5 113 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 A0A096LPE4 126 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 A0A0B4J2E0 115 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 A0A1B0GX12 115 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 A0A1W2PPZ6 126 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 ZNF587BE7ETH6 402 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms