RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CPSF4LA6NMK7 179 aaKnown RBP12.62□□□□□ -0.39
BRCA1-218ENST00000489037 GSTA4O15217 222 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 CHP2O43745 196 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 THBDP07204 575 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 NQO1P15559 274 aaKnown RBP12.62□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF43P17038 809 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 NUDT2P50583 147 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 ART1P52961 327 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 IST1P53990 364 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 GYS2P54840 703 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 CDH12P55289 794 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 TGFBR3Q03167 851 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 EGR4Q05215 589 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 C1DQ13901 141 aaKnown RBP12.62□□□□□ -0.39
BRCA1-218ENST00000489037 LRRC23Q53EV4 343 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-218ENST00000489037 TTC33Q6PID6 262 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-218ENST00000489037 MICU2Q8IYU8 434 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 POMGNT2Q8NAT1 580 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 OR6S1Q8NH40 331 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 TAAR8Q969N4 342 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 TMEM43Q9BTV4 400 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 LIME1Q9H400 295 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 ESRP2Q9H6T0 727 aaKnown RBP12.62□□□□□ -0.39
BRCA1-218ENST00000489037 CCM2LQ9NUG4 571 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-218ENST00000489037 TAS2R16Q9NYV7 291 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 B3GALT5Q9Y2C3 310 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 SH3GLB1Q9Y371 365 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 CORINQ9Y5Q5 1042 aa12.62□□□□□ -0.39
BRCA1-218ENST00000489037 TRAPPC13A5PLN9 417 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 FTCDNL1E5RQL4 147 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 AKAP8O43823 692 aaKnown RBP12.61□□□□□ -0.39
BRCA1-218ENST00000489037 TPST2O60704 377 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 COX5AP20674 150 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 EDNRAP25101 427 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 PRDX6P30041 224 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 GRPRP30550 384 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 IFNA8P32881 189 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 KDELR2P33947 212 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 PPA1Q15181 289 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 TAB1Q15750 504 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 TIMM23BQ5SRD1 257 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 OR7E24Q6IFN5 339 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 HACD2Q6Y1H2 254 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 C22orf34Q6ZV56 151 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 CREB3L2Q70SY1 520 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 H1FNTQ75WM6 255 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-218ENST00000489037 CARM1Q86X55 608 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 TREML1Q86YW5 311 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 P3H2Q8IVL5 708 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF433Q8N7K0 673 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-218ENST00000489037 ADAMTS16Q8TE57 1224 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 PLPPR2Q96GM1 343 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 MPP4Q96JB8 637 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 OXGR1Q96P68 337 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 WFDC6Q9BQY6 131 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 PTDSS2Q9BVG9 487 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 SLCO5A1Q9H2Y9 848 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 MALT1Q9UDY8 824 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 ARL2BPQ9Y2Y0 163 aa12.61□□□□□ -0.39
BRCA1-218ENST00000489037 CADP27708 2225 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 IGKV1D-42A0A075B6H8 117 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 M0R082 166 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 SIAH2O43255 324 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 KLF4O43474 513 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 RAD51DO75771 328 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 OR6A2O95222 327 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 CD3EP07766 207 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 CBLP22681 906 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 HOXC12P31275 282 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 P2RY4P51582 365 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 SLC7A2P52569 658 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 TAS2R41P59536 307 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 LIPEQ05469 1076 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 PMS2P3Q13401 168 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 CYBRD1Q53TN4 286 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 NIPAL3Q6P499 406 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 RBM45Q8IUH3 476 aaKnown RBP12.6□□□□□ -0.39
BRCA1-218ENST00000489037 SLC15A3Q8IY34 581 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF417Q8TAU3 575 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 TPD52L3Q96J77 140 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF385AQ96PM9 386 aaKnown RBP12.6□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF587Q96SQ5 575 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-218ENST00000489037 FOXC2Q99958 501 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 POLR2J2Q9GZM3 115 aaKnown RBP12.6□□□□□ -0.39
BRCA1-218ENST00000489037 POLR2J3Q9H1A7 115 aaKnown RBP12.6□□□□□ -0.39
BRCA1-218ENST00000489037 MYLK2Q9H1R3 596 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 SLC7A10Q9NS82 523 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 CMTM6Q9NX76 183 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 SLC7A7Q9UM01 511 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 USP22Q9UPT9 525 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 ARID1AO14497 2285 aa12.6□□□□□ -0.39
BRCA1-218ENST00000489037 ALPK2Q86TB3 2170 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 OR5H1A6NKK0 313 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 GMNNO75496 209 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 DCTN3O75935 186 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 MT-ATP6P00846 226 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 HIST1H2ABP04908 130 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms