RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 DNAJA4Q8WW22 397 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 GTPBP3Q969Y2 492 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 THOC1Q96FV9 657 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 COX4I2Q96KJ9 171 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 MUS81Q96NY9 551 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 ZNF317Q96PQ6 595 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 CPPED1Q9BRF8 314 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 AMBRA1Q9C0C7 1298 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 SLC7A10Q9NS82 523 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 NPAP1Q9NZP6 1156 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 SELENONQ9NZV5 590 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 SLC25A15Q9Y619 301 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 MTORP42345 2549 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 A0A0G2JND7 137 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 OR2T1O43869 369 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 KRT33AO76009 404 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 DANCRP0C864 163 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 RGS8P57771 180 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 RBBP4Q09028 425 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 CYP51A1Q16850 503 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 RUNDC3AQ59EK9 446 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 FAM69AQ5T7M9 428 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 METTL21CQ5VZV1 264 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 DLEU7Q6UYE1 221 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 RANBP3LQ86VV4 465 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 ARMC8Q8IUR7 673 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 SLC30A8Q8IWU4 369 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 DEPDC4Q8N2C3 294 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 C10orf111Q8N326 155 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 C11orf65Q8NCR3 313 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 SLC38A4Q969I6 547 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF385AQ96PM9 386 aaKnown RBP12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 GSX1Q9H4S2 264 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 IKZF5Q9H5V7 419 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF385DQ9H6B1 395 aa12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
SPTLC1-207ENST00000488921 A0A1B0GWA3 101 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 SHISA9B4DS77 424 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 FTCDNL1E5RQL4 147 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF587BE7ETH6 402 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 H7C1Q1 480 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 AIM2O14862 343 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 FZD7O75084 574 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 WNT11O96014 354 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 SOD3P08294 240 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 PAX7P23759 505 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 RPS5P46782 204 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF83P51522 516 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 P2RY4P51582 365 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 ARFIP2P53365 341 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 HOXC5Q00444 222 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 EGR4Q05215 589 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 MFSD13AQ14CX5 517 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 C9orf135Q5VTT2 229 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 ULK3Q6PHR2 472 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 CLEC9AQ6UXN8 241 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 CREB3L2Q70SY1 520 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 ZIC4Q8N9L1 334 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 NEUROG1Q92886 237 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 SLC25A36Q96CQ1 311 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 SLC47A1Q96FL8 570 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 ANKRD27Q96NW4 1050 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 CGREF1Q99674 301 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 ELAC2Q9BQ52 826 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 PTDSS2Q9BVG9 487 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 TMEM27Q9HBJ8 222 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 KLHL14Q9P2G3 628 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 POU2F3Q9UKI9 436 aa12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 HEATR1Q9H583 2144 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-207ENST00000488921 SETD2Q9BYW2 2564 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 TRAV36DV7A0A075B6V5 113 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 M0R1B8 84 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 OVOL3O00110 214 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 HEXAP06865 529 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF43P17038 809 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 CD40P25942 277 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 HTR2AP28223 471 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 AQP1P29972 269 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 FOXG1P55316 489 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 PRPS1P60891 318 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 NFYCQ13952 458 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 ADRM1Q16186 407 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 PGGHGQ32M88 737 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 KRTAP21-3Q3LHN1 58 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 AGAP6Q5VW22 663 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 SLC22A25Q6T423 547 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 DTX2Q86UW9 622 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 BOD1Q96IK1 185 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 EPYCQ99645 322 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 TRAF4Q9BUZ4 470 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 RCE1Q9Y256 329 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 B3GALT5Q9Y2C3 310 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms