RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 FAM107BQ9H098 131 aa12.53□□□□□ -0.4
COL9A2-208ENST00000488463 PCDHAC1Q9H158 963 aa12.53□□□□□ -0.4
COL9A2-208ENST00000488463 CCM2LQ9NUG4 571 aaPredicted RBP12.53□□□□□ -0.4
COL9A2-208ENST00000488463 ADPRHL2Q9NX46 363 aa12.53□□□□□ -0.4
COL9A2-208ENST00000488463 GMPR2Q9P2T1 348 aaKnown RBP12.53□□□□□ -0.4
COL9A2-208ENST00000488463 B3GAT1Q9P2W7 334 aa12.53□□□□□ -0.4
COL9A2-208ENST00000488463 ITGB1BP2Q9UKP3 347 aa12.53□□□□□ -0.4
COL9A2-208ENST00000488463 SLC9A8Q9Y2E8 581 aa12.53□□□□□ -0.4
COL9A2-208ENST00000488463 USF3Q68DE3 2245 aa12.53□□□□□ -0.4
COL9A2-208ENST00000488463 ELOA3DA6NLF2 546 aaPredicted RBP12.52□□□□□ -0.41
COL9A2-208ENST00000488463 CCDC22O60826 627 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 MRPL33O75394 65 aaKnown RBP12.52□□□□□ -0.41
COL9A2-208ENST00000488463 AHSA1O95433 338 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 ITGA5P08648 1049 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 CD53P19397 219 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 ELOA3BQ3SY89 546 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 BEX5Q5H9J7 111 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 SWT1Q5T5J6 900 aaKnown RBP12.52□□□□□ -0.41
COL9A2-208ENST00000488463 INTS11Q5TA45 600 aaKnown RBP12.52□□□□□ -0.41
COL9A2-208ENST00000488463 NHLRC1Q6VVB1 395 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 WDR88Q6ZMY6 472 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 CREB3L2Q70SY1 520 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 SLC15A3Q8IY34 581 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 ELOA3Q8NG57 546 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 IGFBPL1Q8WX77 278 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 HSD17B8Q92506 261 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 SLC47A1Q96FL8 570 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 MCHR1Q99705 422 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 FOXC2Q99958 501 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 ECSITQ9BQ95 431 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 ZNF426Q9BUY5 554 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 AMBRA1Q9C0C7 1298 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 SLC7A10Q9NS82 523 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 GID8Q9NWU2 228 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 RPS6KB2Q9UBS0 482 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 TLN2Q9Y4G6 2542 aa12.52□□□□□ -0.41
COL9A2-208ENST00000488463 NSD1Q96L73 2696 aaPredicted RBP12.52□□□□□ -0.41
COL9A2-208ENST00000488463 TRAV36DV7A0A075B6V5 113 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 FAM220BPB1ANY3 271 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 SHOX2O60902 331 aaPredicted RBP12.51□□□□□ -0.41
COL9A2-208ENST00000488463 VAMP5O95183 116 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 FAM107AO95990 144 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 PLAUP00749 431 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 RAF1P04049 648 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 IL32P24001 234 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 ART1P52961 327 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 ENTPD8Q5MY95 495 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 FAM69AQ5T7M9 428 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 TSPO2Q5TGU0 170 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
COL9A2-208ENST00000488463 FBXW10Q5XX13 1052 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 ZNF613Q6PF04 617 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 C5orf46Q6UWT4 87 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
COL9A2-208ENST00000488463 WFDC8Q8IUA0 241 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 ANKS4BQ8N8V4 417 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 SLC41A3Q96GZ6 507 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 USB1Q9BQ65 265 aaKnown RBP12.51□□□□□ -0.41
COL9A2-208ENST00000488463 TMEM43Q9BTV4 400 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 TMEM27Q9HBJ8 222 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 PARPBPQ9NWS1 579 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 RASD1Q9Y272 281 aa12.51□□□□□ -0.41
COL9A2-208ENST00000488463 LOC102725191A0A1B0GVB3 256 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 OR5H1A6NKK0 313 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 M0R082 166 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 NME4O00746 187 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 OR2T1O43869 369 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 ZNF432O94892 652 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 HPRP00739 348 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 BGLAPP02818 100 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 GRPRP30550 384 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 GABRA6Q16445 453 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 NCMAPQ5T1S8 102 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 ERICH5Q6P6B1 374 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 CASP12Q6UXS9 341 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 HACD2Q6Y1H2 254 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 GPAT4Q86UL3 456 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 KDM8Q8N371 416 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 ADPRHL1Q8NDY3 354 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 LILRB1Q8NHL6 650 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-208ENST00000488463 ZNF417Q8TAU3 575 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 ADAMTS16Q8TE57 1224 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 SLC25A36Q96CQ1 311 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 PLPPR2Q96GM1 343 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 MUS81Q96NY9 551 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 MOGAT1Q96PD6 335 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 ZNF587Q96SQ5 575 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-208ENST00000488463 PRSS27Q9BQR3 290 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 ASB6Q9NWX5 421 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 NPAP1Q9NZP6 1156 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 SLC13A4Q9UKG4 626 aa12.5□□□□□ -0.41
COL9A2-208ENST00000488463 DPRXA6NFQ7 191 aa12.49□□□□□ -0.41
COL9A2-208ENST00000488463 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
COL9A2-208ENST00000488463 LRRN3E7EW58 273 aa12.49□□□□□ -0.41
COL9A2-208ENST00000488463 MS4A18H0YCH9 400 aa12.49□□□□□ -0.41
COL9A2-208ENST00000488463 NDUFAB1O14561 156 aa12.49□□□□□ -0.41
COL9A2-208ENST00000488463 AIM2O14862 343 aa12.49□□□□□ -0.41
COL9A2-208ENST00000488463 CHP2O43745 196 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms