RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 LDLRP01130 860 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 IGF2P01344 180 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 IFI30P13284 250 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 FUT1P19526 365 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 UQCRFS1P47985 274 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 AGFG1P52594 562 aaKnown RBP9.21□□□□□ -0.94
SKA1-204ENST00000488454 HMGA2P52926 109 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 IL1RL1Q01638 556 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 GK3PQ14409 553 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 RNPS1Q15287 305 aaKnown RBP9.21□□□□□ -0.94
SKA1-204ENST00000488454 TAF11Q15544 211 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 ZNF239Q16600 458 aaKnown RBP9.21□□□□□ -0.94
SKA1-204ENST00000488454 EEF1A1P5Q5VTE0 462 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 TMEM225Q6GV28 225 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 OR2A2Q6IF42 318 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 TBPL2Q6SJ96 375 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 PAQR6Q6TCH4 344 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 FCRLAQ7L513 359 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 MAMDC2Q7Z304 686 aaPredicted RBP9.21□□□□□ -0.94
SKA1-204ENST00000488454 FJX1Q86VR8 437 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 PFN4Q8NHR9 129 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 FNDC9Q8TBE3 224 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 PIGXQ8TBF5 258 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 SLC7A13Q8TCU3 470 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 PYDC1Q8WXC3 89 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 ROBO4Q8WZ75 1007 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 RND1Q92730 232 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 BPIFA2Q96DR5 249 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 DHRS1Q96LJ7 313 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 TTYH2Q9BSA4 534 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 BDH2Q9BUT1 245 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 ZNF426Q9BUY5 554 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 PTDSS2Q9BVG9 487 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 SRXN1Q9BYN0 137 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 COQ10BQ9H8M1 238 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 NANSQ9NR45 359 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 GLRX2Q9NS18 164 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 MAN2C1Q9NTJ4 1040 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 DNAJB9Q9UBS3 223 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 TMEM5Q9Y2B1 443 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 CORINQ9Y5Q5 1042 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 NCKAP5O14513 1909 aa9.21□□□□□ -0.94
SKA1-204ENST00000488454 SVILO95425 2214 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 ZNF407Q9C0G0 2248 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 KALRNO60229 2985 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 IGHV3-15A0A0B4J1V0 119 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 TRBV4-1A0A0J9YWV2 114 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 SH3PXD2BA1X283 911 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 ENO4A6NNW6 628 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 HSPB2A8KAH6 182 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 J3QKU1 62 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 OR10H3O60404 316 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 ENTPD5O75356 428 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 OR7A10O76100 309 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 CCNB2O95067 398 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 AKR7A3O95154 331 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 RCBTB2O95199 551 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 TGM6O95932 706 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 GLI4P10075 376 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 SAGP10523 405 aaPredicted RBP9.2□□□□□ -0.94
SKA1-204ENST00000488454 PLA2G2AP14555 144 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 HOXB4P17483 251 aaPredicted RBP9.2□□□□□ -0.94
SKA1-204ENST00000488454 GRPRP30550 384 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 DNAJA1P31689 397 aaKnown RBP9.2□□□□□ -0.94
SKA1-204ENST00000488454 TIMP3P35625 211 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 SMSP52788 366 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 UGT2B15P54855 530 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 PRKCDQ05655 676 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 RASGEF1BQ0VAM2 473 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 PMS2P3Q13401 168 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 HSPB2Q16082 182 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 ZNF74Q16587 644 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 EXOC3L2Q2M3D2 409 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 C11orf91Q3C1V1 193 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 OTUD3Q5T2D3 398 aaPredicted RBP9.2□□□□□ -0.94
SKA1-204ENST00000488454 RIPPLY2Q5TAB7 128 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 RTL6Q6ICC9 239 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 H1FNTQ75WM6 255 aaPredicted RBP9.2□□□□□ -0.94
SKA1-204ENST00000488454 ADGRE4PQ86SQ3 457 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 NRMQ8IXM6 262 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 OR4K5Q8NGD3 323 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 ZFP3Q96NJ6 502 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 FKRPQ9H9S5 495 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 MEPEQ9NQ76 525 aaPredicted RBP9.2□□□□□ -0.94
SKA1-204ENST00000488454 COQ3Q9NZJ6 369 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 KLHL9Q9P2J3 617 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 CLCF1Q9UBD9 225 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 ZNF229Q9UJW7 825 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 RASD1Q9Y272 281 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 SLC5A6Q9Y289 635 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 B3GALT5Q9Y2C3 310 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 FAM215AQ9Y5M1 114 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 LYVE1Q9Y5Y7 322 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 U3KQV3 271 aa9.2□□□□□ -0.94
SKA1-204ENST00000488454 PRRC2CQ9Y520 2896 aaKnown RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 FREM3P0C091 2139 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 DNAJC13O75165 2243 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 MBD3L4A6NDZ8 208 aaPredicted RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 MBD3L3A6NE82 208 aaPredicted RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 MBD3L5A6NJ08 208 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms