RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 BEX2Q9BXY8 128 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 ARMC7Q9H6L4 198 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 RMND5AQ9H871 391 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 MANSC1Q9H8J5 431 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 THUMPD1Q9NXG2 353 aaKnown RBP13.37□□□□□ -0.27
TRIM50-203ENST00000488217 RASD1Q9Y272 281 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 CHST2Q9Y4C5 530 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 DSPPQ9NZW4 1301 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 FBN3Q75N90 2809 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 ABCA1O95477 2261 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 A0A096LPI6 279 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 OR6C65A6NJZ3 312 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 ATP6V1G2-DDX39BF2Z307 99 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 NPIPB7O75200 414 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 LGI1O95970 557 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 SELENOPP49908 381 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 DSTNP60981 165 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 TBRG1Q3YBR2 411 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 RNF220Q5VTB9 566 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 ATG16L1Q676U5 607 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 STK35Q8TDR2 534 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 SPATA9Q9BWV2 254 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 SDR39U1Q9NRG7 319 aaPredicted RBP13.36□□□□□ -0.27
TRIM50-203ENST00000488217 TMEM160Q9NX00 188 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 ZIM2Q9NZV7 527 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 ZNF443Q9Y2A4 671 aaPredicted RBP13.36□□□□□ -0.27
TRIM50-203ENST00000488217 IFT52Q9Y366 437 aa13.36□□□□□ -0.27
TRIM50-203ENST00000488217 SONP18583 2426 aaKnown RBP13.36□□□□□ -0.27
TRIM50-203ENST00000488217 IGHV1-18A0A0C4DH31 117 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 TMEM120BA0PK00 339 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 TMEM247A6NEH6 219 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 ZNF587BE7ETH6 402 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 LY6HO94772 140 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 CRYAAP02489 173 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 BCHEP06276 602 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
TRIM50-203ENST00000488217 SLC18A1P54219 525 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 UBE2NP61088 152 aaKnown RBP13.35□□□□□ -0.27
TRIM50-203ENST00000488217 LGALS3BPQ08380 585 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 ZNF311Q5JNZ3 666 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 SERPINA11Q86U17 422 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 KDM8Q8N371 416 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 MFSD8Q8NHS3 518 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 SLC25A36Q96CQ1 311 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 MAELQ96JY0 434 aaKnown RBP13.35□□□□□ -0.27
TRIM50-203ENST00000488217 ZNF317Q96PQ6 595 aaPredicted RBP13.35□□□□□ -0.27
TRIM50-203ENST00000488217 SLC38A2Q96QD8 506 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 KCNS3Q9BQ31 491 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 CACYBPQ9HB71 228 aaKnown RBP13.35□□□□□ -0.27
TRIM50-203ENST00000488217 BCL2L10Q9HD36 194 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 SVEP1Q4LDE5 3571 aa13.35□□□□□ -0.27
TRIM50-203ENST00000488217 VSTM5A8MXK1 200 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 TMEM229AB2RXF0 380 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 B9A039 149 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 FTCDNL1E5RQL4 147 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 NDUFS8O00217 210 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 NR5A2O00482 541 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 UBDO15205 165 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 UPK3AO75631 287 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 PDLIM4P50479 330 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 POLR2JP52435 117 aaKnown RBP13.34□□□□□ -0.27
TRIM50-203ENST00000488217 SLC9B1Q4ZJI4 515 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 RPS26P11Q5JNZ5 115 aaPredicted RBP13.34□□□□□ -0.27
TRIM50-203ENST00000488217 PRAMEF8Q5VWM4 474 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 PRAMEF7Q5VXH5 474 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 NIPAL3Q6P499 406 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 MSANTD1Q6ZTZ1 278 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 LINGO2Q7L985 606 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 PHC2Q8IXK0 858 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 FAM169BQ8N8A8 192 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 MAGEE2Q8TD90 523 aaPredicted RBP13.34□□□□□ -0.27
TRIM50-203ENST00000488217 MGARPQ8TDB4 240 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 SLC35B4Q969S0 331 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 C3orf49Q96BT1 292 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 TMEM19Q96HH6 336 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 FOXN4Q96NZ1 517 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 KATNB1Q9BVA0 655 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 LINC00470Q9BZP3 86 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 CA10Q9NS85 328 aa13.34□□□□□ -0.27
TRIM50-203ENST00000488217 CRNNQ9UBG3 495 aaPredicted RBP13.34□□□□□ -0.27
TRIM50-203ENST00000488217 A0A096LPE4 126 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 ARPC4-TTLL3A0A0A6YYG9 625 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 A0A1W2PPZ6 126 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 VWC2LB2RUY7 222 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 FRS3O43559 492 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 LMX1BO60663 402 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 AHSA1O95433 338 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 OR4A8P0C604 315 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 IGHV4-31P0DP07 118 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 ZNF43P17038 809 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 NR4A2P43354 598 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 GZMKP49863 264 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 SNRPD2P62316 118 aaKnown RBP13.33□□□□□ -0.28
TRIM50-203ENST00000488217 HOXC5Q00444 222 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 EGR4Q05215 589 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 RGNQ15493 299 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 C3orf36Q3SXR2 165 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 GTDC1Q4AE62 458 aa13.33□□□□□ -0.28
TRIM50-203ENST00000488217 C6orf10Q5SRN2 563 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms