RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 MEPEQ9NQ76 525 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-214ENST00000487615 PCYT1BQ9Y5K3 369 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-214ENST00000487615 NPFFR2Q9Y5X5 522 aa10.87□□□□□ -0.67
TRA2B-214ENST00000487615 THSD7BQ9C0I4 1608 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 TRAV18A0A075B6X5 111 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 TRBV11-1A0A0K0K1C0 115 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 KDM4EB2RXH2 506 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ACOT7O00154 380 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ZFAND5O76080 213 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 GLCEO94923 617 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 VAMP1P23763 118 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 PPICP45877 212 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 CTBP2P56545 445 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 BDH1Q02338 343 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 SMCO1Q147U7 214 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF628Q5EBL2 1059 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF704Q6ZNC4 412 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-214ENST00000487615 OR4D11Q8NGI4 311 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 OR4Q3Q8NH05 313 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 LRFN5Q96NI6 719 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 OR14A2Q96R54 314 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 SYT4Q9H2B2 425 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 B3GAT2Q9NPZ5 323 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 NOP16Q9Y3C1 178 aaKnown RBP10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ADAM18Q9Y3Q7 739 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 SCRG1O75711 98 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 NKX2-2O95096 273 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 HIST1H1CP16403 213 aaKnown RBP10.86□□□□□ -0.67
TRA2B-214ENST00000487615 SFTPDP35247 375 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 SOX18P35713 384 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ACTBP60709 375 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ACTG1P63261 375 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 CHAF1BQ13112 559 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 FCRL6Q6DN72 434 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 C5orf46Q6UWT4 87 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 CCDC71Q8IV32 467 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-214ENST00000487615 SYNPRQ8TBG9 265 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 MNTQ99583 582 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 OR10A4Q9H209 315 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ELOVL3Q9HB03 270 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 MRPS2Q9Y399 296 aaKnown RBP10.86□□□□□ -0.67
TRA2B-214ENST00000487615 LOC100509620A0A075B734 347 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 NAP1L6A6NFF2 107 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 LILRA5A6NI73 299 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ADAM23O75077 832 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 TOXO94900 526 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 TMPRSS9Q7Z410 1059 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 PHYHIPQ92561 330 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 LMF1Q96S06 567 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF717Q9BY31 904 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-214ENST00000487615 REV1Q9UBZ9 1251 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 DOCK6Q96HP0 2047 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 A0A1W2PS29 197 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 EML2O95834 649 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 CSTBP04080 98 aaKnown RBP10.86□□□□□ -0.67
TRA2B-214ENST00000487615 PRSS3P35030 304 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 PRKXP51817 358 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 FZD2Q14332 565 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 PDSS1Q5T2R2 415 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 VASNQ6EMK4 673 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 OR7E24Q6IFN5 339 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 MTFR2Q6P444 385 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 GDPD3Q7L5L3 318 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 MISPQ8IVT2 679 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 ASB17Q8WXJ9 295 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 MVB12AQ96EY5 273 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 SYNPO2LQ9H987 977 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 NPAP1Q9NZP6 1156 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 NCDNQ9UBB6 729 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 MGAT4CQ9UBM8 478 aa10.86□□□□□ -0.67
TRA2B-214ENST00000487615 TMED7-TICAM2A0A0A6YYA0 188 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 GCM2O75603 506 aaPredicted RBP10.85□□□□□ -0.67
TRA2B-214ENST00000487615 RAB40ALP0C0E4 278 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 GIFP27352 417 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF84P51523 738 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 GALK2Q01415 458 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 POU3F1Q03052 451 aaPredicted RBP10.85□□□□□ -0.67
TRA2B-214ENST00000487615 SSX1Q16384 188 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 RAB40AQ8WXH6 277 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 OR5B2Q96R09 309 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 STRADBQ9C0K7 418 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 TMED7Q9Y3B3 224 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 DCDC2BA2VCK2 349 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 C5orf51A6NDU8 294 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 SELENOFO60613 162 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 KDM4BO94953 1096 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 UBL3O95164 117 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 SEMG1P04279 462 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 PTBP1P26599 531 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRA2B-214ENST00000487615 EMDP50402 254 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 AP2S1P53680 142 aaPredicted RBP10.85□□□□□ -0.67
TRA2B-214ENST00000487615 EEF1A1P5Q5VTE0 462 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 PAPD4Q6PIY7 484 aaKnown RBP10.85□□□□□ -0.67
TRA2B-214ENST00000487615 KIRREL2Q6UWL6 708 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 FCRLAQ7L513 359 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 NAA11Q9BSU3 229 aaPredicted RBP10.85□□□□□ -0.67
TRA2B-214ENST00000487615 WDR76Q9H967 626 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 HHLA2Q9UM44 414 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 PLEKHA6Q9Y2H5 1048 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms