RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 CCDC121Q6ZUS5 278 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.4■□□□□ 0.38
SEC22A-208ENST00000487572 GALNT5Q7Z7M9 940 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 ZNF610Q8N9Z0 462 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 PFN4Q8NHR9 129 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 TMEM239Q8WW34 195 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 C7orf34Q96L11 122 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 ZNF426Q9BUY5 554 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 ASPNQ9BXN1 380 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 CHST11Q9NPF2 352 aa17.4■□□□□ 0.38
SEC22A-208ENST00000487572 UTP20O75691 2785 aaKnown RBP17.4■□□□□ 0.38
SEC22A-208ENST00000487572 USP9YO00507 2555 aaPredicted RBP17.39■□□□□ 0.38
SEC22A-208ENST00000487572 IGKV3D-15A0A087WSY6 115 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 TCRBV5S2A0A599 114 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 PIP5K1CO60331 668 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 CD8BP10966 210 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 NQO1P15559 274 aaKnown RBP17.39■□□□□ 0.37
SEC22A-208ENST00000487572 RBM34P42696 430 aaKnown RBP17.39■□□□□ 0.37
SEC22A-208ENST00000487572 SLC16A1P53985 500 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 TRAM2Q15035 370 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 SP5Q6BEB4 398 aaPredicted RBP17.39■□□□□ 0.37
SEC22A-208ENST00000487572 PGM2L1Q6PCE3 622 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 KDM8Q8N371 416 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 OR9K2Q8NGE7 335 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 OR6S1Q8NH40 331 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 RNASE6Q93091 150 aaKnown RBP17.39■□□□□ 0.37
SEC22A-208ENST00000487572 HS6ST2Q96MM7 605 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 SLC19A3Q9BZV2 496 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 TRIM15Q9C019 465 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 MEPEQ9NQ76 525 aaPredicted RBP17.39■□□□□ 0.37
SEC22A-208ENST00000487572 MAN2C1Q9NTJ4 1040 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 GALNT8Q9NY28 637 aa17.39■□□□□ 0.37
SEC22A-208ENST00000487572 NOSIPQ9Y314 301 aaKnown RBP17.39■□□□□ 0.37
SEC22A-208ENST00000487572 ENO4A6NNW6 628 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 A8MXE2 369 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 EBAG9O00559 213 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 GPR171O14626 319 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 ACOT8O14734 319 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 PRSS23O95084 383 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 FABP3P05413 133 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 UMPSP11172 480 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 ITGA2P17301 1181 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 RHCEP18577 417 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 P2RY4P51582 365 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 TRAP1Q12931 704 aaKnown RBP17.38■□□□□ 0.37
SEC22A-208ENST00000487572 PMS2P3Q13401 168 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 SNTB1Q13884 538 aaKnown RBP17.38■□□□□ 0.37
SEC22A-208ENST00000487572 SLC17A1Q14916 467 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 MFSD13AQ14CX5 517 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 ZNF74Q16587 644 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 ZNF474Q6S9Z5 364 aaPredicted RBP17.38■□□□□ 0.37
SEC22A-208ENST00000487572 H1FNTQ75WM6 255 aaPredicted RBP17.38■□□□□ 0.37
SEC22A-208ENST00000487572 PIP5K1AQ99755 562 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 KLHL4Q9C0H6 718 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 NMNAT1Q9HAN9 279 aaPredicted RBP17.38■□□□□ 0.37
SEC22A-208ENST00000487572 PLSCR4Q9NRQ2 329 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 RASD1Q9Y272 281 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 MED31Q9Y3C7 131 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 TESMINQ9Y4I5 508 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 CORINQ9Y5Q5 1042 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 MPDZO75970 2070 aa17.38■□□□□ 0.37
SEC22A-208ENST00000487572 SPTAN1Q13813 2472 aaKnown RBP17.38■□□□□ 0.37
SEC22A-208ENST00000487572 INTS1Q8N201 2190 aaKnown RBP17.38■□□□□ 0.37
SEC22A-208ENST00000487572 MT-ATP6P00846 226 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 MT-ND1P03886 318 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 H1F0P07305 194 aaKnown RBP17.37■□□□□ 0.37
SEC22A-208ENST00000487572 LSM11P83369 360 aaKnown RBP eCLIP17.37■□□□□ 0.37
SEC22A-208ENST00000487572 FLOT2Q14254 428 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 FBXL19-AS1Q494R0 122 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 FGD3Q5JSP0 725 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 CASP12Q6UXS9 341 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 TFAP2EQ6VUC0 442 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 ZNF730Q6ZMV8 503 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 MEX3BQ6ZN04 569 aaKnown RBP17.37■□□□□ 0.37
SEC22A-208ENST00000487572 STK32CQ86UX6 486 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 ZDHHC21Q8IVQ6 265 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 ZNF100Q8IYN0 542 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 LRRC17Q8N6Y2 441 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 PIK3C3Q8NEB9 887 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 SF3B5Q9BWJ5 86 aaKnown RBP17.37■□□□□ 0.37
SEC22A-208ENST00000487572 LRMDAQ9H2I8 198 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 NANSQ9NR45 359 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 C20orf141Q9NUB4 165 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 B3GALT5Q9Y2C3 310 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 FLVCR1Q9Y5Y0 555 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 ICE1Q9Y2F5 2266 aa17.37■□□□□ 0.37
SEC22A-208ENST00000487572 SPTBN1Q01082 2364 aaKnown RBP17.37■□□□□ 0.37
SEC22A-208ENST00000487572 CACNA1CQ13936 2221 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 FZD7O75084 574 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 VAMP5O95183 116 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 EDNRAP25101 427 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 SPIBQ01892 262 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 TBPL2Q6SJ96 375 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 MEX3DQ86XN8 651 aaKnown RBP17.36■□□□□ 0.37
SEC22A-208ENST00000487572 NRMQ8IXM6 262 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 SCAIQ8N9R8 606 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 OR52J3Q8NH60 311 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 SGTBQ96EQ0 304 aa17.36■□□□□ 0.37
SEC22A-208ENST00000487572 ZNF385AQ96PM9 386 aaKnown RBP17.36■□□□□ 0.37
SEC22A-208ENST00000487572 FKRPQ9H9S5 495 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms