RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 MAP1AP78559 2803 aaPredicted RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 IGKV1D-42A0A075B6H8 117 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 A0A0B4J2E0 115 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 A0A1B0GX12 115 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 A0A1W2PR80 420 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 OR2T1O43869 369 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 TMCC2O75069 709 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 FZD7O75084 574 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 LGI1O95970 557 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 OPN1SWP03999 348 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 VIMP08670 466 aaKnown RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 DANCRP0C864 163 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 PAX1P15863 534 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 MPGP29372 298 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 PTH2RP49190 550 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 NCALDP61601 193 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 GUCY1A3Q02108 690 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 TGFBR3Q03167 851 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 KLF10Q13118 480 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 CYLC2Q14093 348 aaPredicted RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 OR1Q1Q15612 314 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 DUSP7Q16829 419 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 ZNF672Q499Z4 452 aaPredicted RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 FAM69AQ5T7M9 428 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 NANOGP8Q6NSW7 305 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 C5orf46Q6UWT4 87 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 NET1Q7Z628 596 aaPredicted RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 YTHDF3Q7Z739 585 aaKnown RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 POMGNT2Q8NAT1 580 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 OR10A6Q8NH74 314 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 SMAP2Q8WU79 429 aaPredicted RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 SLC38A4Q969I6 547 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 TAAR8Q969N4 342 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 FBXW5Q969U6 566 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 SLC47A1Q96FL8 570 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 AMBRA1Q9C0C7 1298 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 SLCO5A1Q9H2Y9 848 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 GSX1Q9H4S2 264 aaPredicted RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 CXorf56Q9H5V9 222 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 EVA1AQ9H8M9 152 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 NANOGQ9H9S0 305 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 TMEM27Q9HBJ8 222 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 SAR1AQ9NR31 198 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 ZNF701Q9NV72 531 aaPredicted RBP10.06□□□□□ -0.8
SPEN-205ENST00000487496 SEC14L4Q9UDX3 406 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 LAMP3Q9UQV4 416 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 C2CD3Q4AC94 2353 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 USF3Q68DE3 2245 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 TRAV36DV7A0A075B6V5 113 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 A0A087WUJ7 227 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 SHISA9B4DS77 424 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 M0R082 166 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 ABCD4O14678 606 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 C8BP07358 591 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 SOD3P08294 240 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 GTF2E2P29084 291 aaKnown RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 SELENOPP49908 381 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 GZMMP51124 257 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 ZNF83P51522 516 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 RPS4XP62701 263 aaKnown RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 TRMT5Q32P41 509 aaKnown RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 NIPAL3Q6P499 406 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 KLHL17Q6TDP4 642 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 TMEM108Q6UXF1 575 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 PATL1Q86TB9 770 aaKnown RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 RANBP3LQ86VV4 465 aaPredicted RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 SLC30A8Q8IWU4 369 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 C17orf78Q8N4C9 275 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 WDR31Q8NA23 367 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 C1orf162Q8NEQ5 155 aaPredicted RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 GPR32P1Q8NGA4 272 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 ZNF417Q8TAU3 575 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 RNF217Q8TC41 542 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 RADILQ96JH8 1075 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 C18orf12Q96KH6 178 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 Q96MF0 132 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 ZNF587Q96SQ5 575 aaPredicted RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 ARHGDIGQ99819 225 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 C1QTNF6Q9BXI9 259 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 CCDC134Q9H6E4 229 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 SLC17A5Q9NRA2 495 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 MRGBPQ9NV56 204 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 CISD1Q9NZ45 108 aaKnown RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 SELENONQ9NZV5 590 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 B3GAT1Q9P2W7 334 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 B3GALT5Q9Y2C3 310 aa10.05□□□□□ -0.8
SPEN-205ENST00000487496 FLNAP21333 2647 aaKnown RBP10.05□□□□□ -0.8
SPEN-205ENST00000487496 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 OR6C65A6NJZ3 312 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 M0R3H8 397 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 OVOL3O00110 214 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 FXYD1O00168 92 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 AIM2O14862 343 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 FMO6PO60774 539 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 UPK3AO75631 287 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 KRT33AO76009 404 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 KRT34O76011 436 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 INHBBP09529 407 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 ZNF43P17038 809 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 CDH2P19022 906 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms