RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SPATA9Q9BWV2 254 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 TAPBPLQ9BX59 468 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 RSPO3Q9BXY4 272 aaPredicted RBP10.65□□□□□ -0.7
VPS16-208ENST00000487461 RMND5AQ9H871 391 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 MANSC1Q9H8J5 431 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 TMEM45AQ9NWC5 275 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 IGHV1-18A0A0C4DH31 117 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 TMEM229AB2RXF0 380 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 NR5A2O00482 541 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 UBDO15205 165 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 FRS3O43559 492 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 UPK3AO75631 287 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 KRT33AO76009 404 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 LY6HO94772 140 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 VAMP5O95183 116 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 F12P00748 615 aaPredicted RBP10.64□□□□□ -0.71
VPS16-208ENST00000487461 NCF2P19878 526 aaPredicted RBP10.64□□□□□ -0.71
VPS16-208ENST00000487461 POLR2JP52435 117 aaKnown RBP10.64□□□□□ -0.71
VPS16-208ENST00000487461 SLC18A1P54219 525 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 VLDLRP98155 873 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 EGR4Q05215 589 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 ZSWIM7Q19AV6 140 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 SWI5Q1ZZU3 235 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 TBRG1Q3YBR2 411 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 CHRFAM7AQ494W8 412 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 ZNF311Q5JNZ3 666 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 C6orf52Q5T4I8 152 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 PODNL1Q6PEZ8 512 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 MSANTD1Q6ZTZ1 278 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 ABHD12BQ7Z5M8 362 aaPredicted RBP10.64□□□□□ -0.71
VPS16-208ENST00000487461 KDM8Q8N371 416 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 OR1K1Q8NGR3 316 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 STK35Q8TDR2 534 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 C10orf105Q8TEF2 133 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 GTF2H4Q92759 462 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 BCL2L2Q92843 193 aaPredicted RBP10.64□□□□□ -0.71
VPS16-208ENST00000487461 FBXO17Q96EF6 278 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 THUMPD1Q9NXG2 353 aaKnown RBP10.64□□□□□ -0.71
VPS16-208ENST00000487461 RASD1Q9Y272 281 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 IFT52Q9Y366 437 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 PCDHB14Q9Y5E9 798 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 PMF1-BGLAPU3KQ54 211 aa10.64□□□□□ -0.71
VPS16-208ENST00000487461 YLPM1P49750 1951 aaKnown RBP10.63□□□□□ -0.71
VPS16-208ENST00000487461 FTCDNL1E5RQL4 147 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 IFNA2P01563 188 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 BMP4P12644 408 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 SLC25A16P16260 332 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 MAGOHP61326 146 aaKnown RBP10.63□□□□□ -0.71
VPS16-208ENST00000487461 TUBA1BP68363 451 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 TUBA4AP68366 448 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 RGNQ15493 299 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 C6orf10Q5SRN2 563 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 PRAMEF8Q5VWM4 474 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 PRAMEF7Q5VXH5 474 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 NIPAL3Q6P499 406 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 ANKRD16Q6P6B7 361 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 SLC2A7Q6PXP3 512 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 KLHL24Q6TFL4 600 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 TUBA1AQ71U36 451 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 MFSD8Q8NHS3 518 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 PROX1Q92786 737 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 MAL2Q969L2 176 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 SLC25A36Q96CQ1 311 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 KTI12Q96EK9 354 aaPredicted RBP10.63□□□□□ -0.71
VPS16-208ENST00000487461 SLC38A2Q96QD8 506 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 PTDSS2Q9BVG9 487 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 PAIP1Q9H074 479 aaKnown RBP10.63□□□□□ -0.71
VPS16-208ENST00000487461 ARMC7Q9H6L4 198 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 BCL2L10Q9HD36 194 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 OBP2BQ9NPH6 170 aa10.63□□□□□ -0.71
VPS16-208ENST00000487461 ARFGEF3Q5TH69 2177 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 A0A096LPE4 126 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 A0A096LPI6 279 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 ARPC4-TTLL3A0A0A6YYG9 625 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 A0A1W2PPZ6 126 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 TMEM247A6NEH6 219 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 RNF212BA8MTL3 300 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 ZNF587BE7ETH6 402 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 CLIC1O00299 241 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 AHSA1O95433 338 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 IGHV4-31P0DP07 118 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 PNMTP11086 282 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 HOXB9P17482 250 aaPredicted RBP10.62□□□□□ -0.71
VPS16-208ENST00000487461 USF1P22415 310 aaPredicted RBP10.62□□□□□ -0.71
VPS16-208ENST00000487461 SERPINF1P36955 418 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 RPS5P46782 204 aaKnown RBP10.62□□□□□ -0.71
VPS16-208ENST00000487461 CLDN17P56750 224 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 CYB5R2Q6BCY4 276 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 EPGNQ6UW88 154 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 MIER2Q8N344 545 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 TLCD1Q96CP7 247 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 KCNK17Q96T54 332 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 NELFAQ9H3P2 528 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 CACYBPQ9HB71 228 aaKnown RBP10.62□□□□□ -0.71
VPS16-208ENST00000487461 A4GALTQ9NPC4 353 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 NKIRAS1Q9NYS0 192 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 CRNNQ9UBG3 495 aaPredicted RBP10.62□□□□□ -0.71
VPS16-208ENST00000487461 SEC14L4Q9UDX3 406 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 CUBNO60494 3623 aa10.62□□□□□ -0.71
VPS16-208ENST00000487461 STAB1Q9NY15 2570 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms