RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SLCO1B3Q9NPD5 702 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 TCF7L2Q9NQB0 619 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 SLC25A37Q9NYZ2 338 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 A0A096LPI6 279 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 C5orf58C9J3I9 102 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 ATP6V1G2-DDX39BF2Z307 99 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 GPRIN2O60269 458 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 LGI1O95970 557 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 RPS5P46782 204 aaKnown RBP21.46■■□□□ 1.03
LIME1-206ENST00000487026 IDH3AP50213 366 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 STX1BP61266 288 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 EGR4Q05215 589 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 NIPAL3Q6P499 406 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 LINGO2Q7L985 606 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 MSRB3Q8IXL7 192 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 C10orf111Q8N326 155 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 STK35Q8TDR2 534 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 RAD21L1Q9H4I0 556 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 PIF1Q9H611 641 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 FKRPQ9H9S5 495 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 YAE1D1Q9NRH1 226 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 MOKQ9UQ07 419 aa21.46■■□□□ 1.03
LIME1-206ENST00000487026 POLR3GO15318 223 aaPredicted RBP21.45■■□□□ 1.02
LIME1-206ENST00000487026 VAMP5O95183 116 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 AHSA1O95433 338 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 WNT11O96014 354 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 BMP2P12643 396 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 FADDQ13158 208 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 ZNF544Q6NX49 715 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 KLHL24Q6TFL4 600 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 GOLGA6L1Q8N7Z2 621 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 NFKBIDQ8NI38 313 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 BBS10Q8TAM1 723 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 KTI12Q96EK9 354 aaPredicted RBP21.45■■□□□ 1.02
LIME1-206ENST00000487026 PTDSS2Q9BVG9 487 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 PRR14Q9BWN1 585 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 TMEM45AQ9NWC5 275 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 SEC14L4Q9UDX3 406 aa21.45■■□□□ 1.02
LIME1-206ENST00000487026 FTCDNL1E5RQL4 147 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 NR5A2O00482 541 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 UPK3AO75631 287 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 PNMTP11086 282 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 PAGE3Q5JUK9 113 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 AGBL2Q5U5Z8 902 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 BLOC1S3Q6QNY0 202 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 COMTD1Q86VU5 262 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 OR10H5Q8NGA6 315 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 OR1K1Q8NGR3 316 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 MFSD8Q8NHS3 518 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 C7orf26Q96N11 449 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 ALKBH3Q96Q83 286 aaPredicted RBP21.44■■□□□ 1.02
LIME1-206ENST00000487026 CCDC167Q9P0B6 97 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 RPS6KB2Q9UBS0 482 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 RASD1Q9Y272 281 aa21.44■■□□□ 1.02
LIME1-206ENST00000487026 ELOA3DA6NLF2 546 aaPredicted RBP21.43■■□□□ 1.02
LIME1-206ENST00000487026 ZNF587BE7ETH6 402 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 CD5LO43866 347 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 APOBEC3AP31941 199 aaPredicted RBP21.43■■□□□ 1.02
LIME1-206ENST00000487026 MRPL19P49406 292 aaKnown RBP21.43■■□□□ 1.02
LIME1-206ENST00000487026 TUBA1BP68363 451 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 TUBA4AP68366 448 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 ELOA3BQ3SY89 546 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 TBRG1Q3YBR2 411 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 CLEC2AQ6UVW9 174 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 TUBA1AQ71U36 451 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 ABHD12BQ7Z5M8 362 aaPredicted RBP21.43■■□□□ 1.02
LIME1-206ENST00000487026 ZNF525Q8N782 197 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 ELOA3Q8NG57 546 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 LRRC8CQ8TDW0 803 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 SPDL1Q96EA4 605 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 SLC52A3Q9NQ40 469 aa21.43■■□□□ 1.02
LIME1-206ENST00000487026 A0A096LPE4 126 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 IGHV1-18A0A0C4DH31 117 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 A0A1W2PPZ6 126 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 LY6HO94772 140 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 TGDSO95455 350 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 HTR2AP28223 471 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 CLDN17P56750 224 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 CHD3Q12873 2000 aaKnown RBP21.42■■□□□ 1.02
LIME1-206ENST00000487026 GLIPR1L2Q4G1C9 344 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 LRIF1Q5T3J3 769 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 GCNT6Q5T4J0 391 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 BCL2L2Q92843 193 aaPredicted RBP21.42■■□□□ 1.02
LIME1-206ENST00000487026 TAAR8Q969N4 342 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 FBXO17Q96EF6 278 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 VAPAQ9P0L0 249 aa21.42■■□□□ 1.02
LIME1-206ENST00000487026 FBN1P35555 2871 aaKnown RBP21.41■■□□□ 1.02
LIME1-206ENST00000487026 A0A096LNT2 108 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 H7C417 338 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 TPST1O60507 370 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 ARAFP10398 606 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 ETS2P15036 469 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 CBLP22681 906 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 GTF2E2P29084 291 aaKnown RBP21.41■■□□□ 1.02
LIME1-206ENST00000487026 AQP5P55064 265 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 CHRNB3Q05901 458 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 SLC35B4Q969S0 331 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 BOD1Q96IK1 185 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 IKZF5Q9H5V7 419 aa21.41■■□□□ 1.02
LIME1-206ENST00000487026 ATRQ13535 2644 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms