RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CTSBP07858 339 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 ITGA5P08648 1049 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 PIPP12273 146 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-216ENST00000486741 TGFBR2P37173 567 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 SSX1Q16384 188 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 GLYR1Q49A26 553 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-216ENST00000486741 SLC18B1Q6NT16 456 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 THSD4Q6ZMP0 1018 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 SIRT6Q8N6T7 355 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 NPRL2Q8WTW4 380 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 ACOT12Q8WYK0 555 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 NEDD4LQ96PU5 975 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 TRAV18A0A075B6X5 111 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 A0A1B0GVI7 797 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 A0A1B0GW55 424 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 UCHL1P09936 223 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 DUX4L2P0CJ85 424 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 DUX4L3P0CJ86 424 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 DUX4L4P0CJ87 422 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 DUX4L5P0CJ88 424 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 DUX4L6P0CJ89 424 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 DUX4L7P0CJ90 424 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 SLC6A8P48029 635 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 GNG2P59768 71 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 TMEM164Q5U3C3 297 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 GARNL3Q5VVW2 1013 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 C12orf73Q69YU5 71 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 LRRN1Q6UXK5 716 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 FCRLAQ7L513 359 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-216ENST00000486741 KIAA1958Q8N8K9 716 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 SMRP1Q8NCR6 262 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF350Q9GZX5 532 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 ELOVL3Q9HB03 270 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 DUX4Q9UBX2 424 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 TSC2P49815 1807 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 A0A0B4J203 849 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 ICOSLGO75144 302 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
HMGN1-216ENST00000486741 GTF2F2P13984 249 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 STOMP27105 288 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 CRYBA2P53672 197 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 EMP3P54852 163 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 NIPAL3Q6P499 406 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 ESPNLQ6ZVH7 1005 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 PM20D2Q8IYS1 436 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 SLC22A8Q8TCC7 542 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 STT3BQ8TCJ2 826 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 AKIP1Q9NQ31 210 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 ACOXLQ9NUZ1 547 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 REV1Q9UBZ9 1251 aa12.15□□□□□ -0.46
HMGN1-216ENST00000486741 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 CD79BP40259 229 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF628Q5EBL2 1059 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 LAIR2Q6ISS4 152 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 OR2I1PQ8NGU4 316 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 DOK1Q99704 481 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-216ENST00000486741 CMC2Q9NRP2 79 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 MUTYHQ9UIF7 546 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
HMGN1-216ENST00000486741 A0A087WV62 115 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 IGHV1OR15-9A0A0B4J2B8 117 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 EFCAB7A8K855 629 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 RBBP9O75884 186 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 CD14P08571 375 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 POU2F2P09086 479 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 VAMP1P23763 118 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 OR10A3P58181 314 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 OXA1LQ15070 435 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 NR0B2Q15466 257 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 C1QTNF12Q5T7M4 302 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 Q7L0L9 218 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 LINC00346Q8IVM7 164 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 SLITRK4Q8IW52 837 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 CCDC28AQ8IWP9 274 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 RDH10Q8IZV5 341 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 ARHGDIGQ99819 225 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 NDUFB11Q9NX14 153 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 ARRDC5A6NEK1 342 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 IDSB3KWA1 339 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 LMO7DNF2Z398 122 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 LINC00271P0C7V0 271 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF43P17038 809 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 PRICKLE4Q2TBC4 344 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 NKAIN1Q4KMZ8 207 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 OR8H3Q8N146 312 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 ARMC10Q8N2F6 343 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 ASCC1Q8N9N2 400 aaKnown RBP12.14□□□□□ -0.47
HMGN1-216ENST00000486741 OR13C3Q8NGS6 347 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 EDAQ92838 391 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF681Q96N22 645 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 EMC6Q9BV81 110 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 NOX4Q9NPH5 578 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 CTSFQ9UBX1 484 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 NEUROG3Q9Y4Z2 214 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 TMED7-TICAM2A0A0A6YYA0 188 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 A0A1B0GX78 115 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF593O00488 134 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-216ENST00000486741 MBTPS2O43462 519 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms