RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 ROS1P08922 2347 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 IGKV1D-42A0A075B6H8 117 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 TRAV36DV7A0A075B6V5 113 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 A0A0B4J2E0 115 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 A0A1B0GX12 115 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 PDLIM1O00151 329 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 MDH1P40925 334 aaKnown RBP16.12■□□□□ 0.17
CLDN11-206ENST00000486429 OR1Q1Q15612 314 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 VMACQ2NL98 169 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 RABL3Q5HYI8 236 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 SWT1Q5T5J6 900 aaKnown RBP16.12■□□□□ 0.17
CLDN11-206ENST00000486429 FAM69AQ5T7M9 428 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 C9orf135Q5VTT2 229 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 OR7E24Q6IFN5 339 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 NANOGP8Q6NSW7 305 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 P3H2Q8IVL5 708 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 LRRC75A-AS1Q8N1F1 130 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 ZIC4Q8N9L1 334 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 POMGNT2Q8NAT1 580 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 C1orf162Q8NEQ5 155 aaPredicted RBP16.12■□□□□ 0.17
CLDN11-206ENST00000486429 WFDC11Q8NEX6 87 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 GPR32P1Q8NGA4 272 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 SLC26A7Q8TE54 656 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 TMEM171Q8WVE6 324 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 ARHGDIGQ99819 225 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 NANOGQ9H9S0 305 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 NPAP1Q9NZP6 1156 aa16.12■□□□□ 0.17
CLDN11-206ENST00000486429 M0QX08 132 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 AIM2O14862 343 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 SLC22A2O15244 555 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 ARHGEF9O43307 516 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 FMO6PO60774 539 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 FZD7O75084 574 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 LGI1O95970 557 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 C8BP07358 591 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 HOXC12P31275 282 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 FOXG1P55316 489 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-206ENST00000486429 TGFBR3Q03167 851 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 GABRA6Q16445 453 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 NRF1Q16656 503 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 Q5PR19 223 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 SHEQ5VZ18 495 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 ADAM5Q6NVV9 412 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 CREB3L2Q70SY1 520 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 ABHD12BQ7Z5M8 362 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-206ENST00000486429 KRTAP1-3Q8IUG1 177 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 C17orf78Q8N4C9 275 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 PCYOX1LQ8NBM8 494 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 KBTBD8Q8NFY9 601 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 OR52N5Q8NH56 324 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 C10orf82Q8WW14 230 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 FBXW5Q969U6 566 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 TAMM41Q96BW9 452 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 EPYCQ99645 322 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 MCHR1Q99705 422 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 WFDC6Q9BQY6 131 aa16.11■□□□□ 0.17
CLDN11-206ENST00000486429 A0A087WUJ7 227 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 DPRXA6NFQ7 191 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 OR6C65A6NJZ3 312 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 M0R082 166 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 TPST2O60704 377 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 KRT33AO76009 404 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 NPPAP01160 153 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 MPGP29372 298 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 GRPRP30550 384 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 SELENOPP49908 381 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 GZMMP51124 257 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 DUSP7Q16829 419 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 ZNF613Q6PF04 617 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 EPHX4Q8IUS5 362 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 ZNF417Q8TAU3 575 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 RASSF5Q8WWW0 418 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 TAAR8Q969N4 342 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 PERPQ96FX8 193 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 MUS81Q96NY9 551 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 ALKBH3Q96Q83 286 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-206ENST00000486429 ZNF587Q96SQ5 575 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-206ENST00000486429 ECSITQ9BQ95 431 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 AMBRA1Q9C0C7 1298 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 CXorf56Q9H5V9 222 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 SEC14L4Q9UDX3 406 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 SLC25A15Q9Y619 301 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 DSCAMO60469 2012 aa16.1■□□□□ 0.17
CLDN11-206ENST00000486429 LOC100653049A0A140TA62 436 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 A0A1W2PR80 420 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 ATP8B1O43520 1251 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 TMCC2O75069 709 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 KRT34O76011 436 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 ZNF43P17038 809 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 CD247P20963 164 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 PTNP21246 168 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 ZNF83P51522 516 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 CDH12P55289 794 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 MFSD13AQ14CX5 517 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 NPTX1Q15818 432 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 NIPAL3Q6P499 406 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 ERICH5Q6P6B1 374 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 KLHL17Q6TDP4 642 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 KLHL24Q6TFL4 600 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 TMEM108Q6UXF1 575 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms