RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 STK35Q8TDR2 534 aa19.61■□□□□ 0.73
SREBF1-214ENST00000486311 SLC35B4Q969S0 331 aa19.61■□□□□ 0.73
SREBF1-214ENST00000486311 PAIP1Q9H074 479 aaKnown RBP19.61■□□□□ 0.73
SREBF1-214ENST00000486311 PCDHB14Q9Y5E9 798 aa19.61■□□□□ 0.73
SREBF1-214ENST00000486311 ABCA1O95477 2261 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 COL6A5A8TX70 2615 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 A0A096LNT2 108 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 NUDT7P0C024 238 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 BMP2P12643 396 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 RGNQ15493 299 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 HIKESHIQ53FT3 197 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 ZNF311Q5JNZ3 666 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 KLHL24Q6TFL4 600 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 CLEC2AQ6UVW9 174 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 CREB3L2Q70SY1 520 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 DYDC1Q8WWB3 177 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 A4GALTQ9NPC4 353 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 OBP2BQ9NPH6 170 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 INTS9Q9NV88 658 aaKnown RBP19.6■□□□□ 0.73
SREBF1-214ENST00000486311 RASD1Q9Y272 281 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 USH1CQ9Y6N9 552 aa19.6■□□□□ 0.73
SREBF1-214ENST00000486311 FBN1P35555 2871 aaKnown RBP19.6■□□□□ 0.73
SREBF1-214ENST00000486311 HOXB9P17482 250 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-214ENST00000486311 CDH2P19022 906 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-214ENST00000486311 APOBEC3AP31941 199 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-214ENST00000486311 MRPL19P49406 292 aaKnown RBP19.59■□□□□ 0.73
SREBF1-214ENST00000486311 FADDQ13158 208 aa19.59■□□□□ 0.73
SREBF1-214ENST00000486311 SLC2A7Q6PXP3 512 aa19.59■□□□□ 0.73
SREBF1-214ENST00000486311 EPGNQ6UW88 154 aa19.59■□□□□ 0.73
SREBF1-214ENST00000486311 EPHX4Q8IUS5 362 aa19.59■□□□□ 0.73
SREBF1-214ENST00000486311 BBS10Q8TAM1 723 aa19.59■□□□□ 0.73
SREBF1-214ENST00000486311 RAD21L1Q9H4I0 556 aa19.59■□□□□ 0.73
SREBF1-214ENST00000486311 YAE1D1Q9NRH1 226 aa19.59■□□□□ 0.73
SREBF1-214ENST00000486311 TMEM45AQ9NWC5 275 aa19.59■□□□□ 0.73
SREBF1-214ENST00000486311 OR6C65A6NJZ3 312 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 ELOA3DA6NLF2 546 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-214ENST00000486311 FTCDNL1E5RQL4 147 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 ZNF587BE7ETH6 402 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 ATP6V1G2-DDX39BF2Z307 99 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 CLIC1O00299 241 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 KRT33AO76009 404 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 AHSA1O95433 338 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 BMP4P12644 408 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 SELENOPP49908 381 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 CHRNB3Q05901 458 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 ELOA3BQ3SY89 546 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 ELOA3Q8NG57 546 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 OR1K1Q8NGR3 316 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 MFSD8Q8NHS3 518 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 HTRA1Q92743 480 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 MAL2Q969L2 176 aa19.58■□□□□ 0.72
SREBF1-214ENST00000486311 GPRIN2O60269 458 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 LGI1O95970 557 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 HOXC5Q00444 222 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 LGALS3BPQ08380 585 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 TBRG1Q3YBR2 411 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 HIPK1Q86Z02 1210 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 ZNF525Q8N782 197 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 PTDSS2Q9BVG9 487 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 MOKQ9UQ07 419 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 PMF1-BGLAPU3KQ54 211 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 CHD3Q12873 2000 aaKnown RBP19.57■□□□□ 0.72
SREBF1-214ENST00000486311 ALPK2Q86TB3 2170 aa19.57■□□□□ 0.72
SREBF1-214ENST00000486311 RTTNQ86VV8 2226 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 FBN3Q75N90 2809 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 FZD7O75084 574 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 PNMTP11086 282 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 SLC25A16P16260 332 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 PAX7P23759 505 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 EFNA4P52798 201 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 EGR4Q05215 589 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 LOXL1Q08397 574 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-214ENST00000486311 NIPAL3Q6P499 406 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 C6orf89Q6UWU4 347 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 CXXC5Q7LFL8 322 aaKnown RBP19.56■□□□□ 0.72
SREBF1-214ENST00000486311 BCL2L2Q92843 193 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-214ENST00000486311 C7orf26Q96N11 449 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 ZNF317Q96PQ6 595 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-214ENST00000486311 ALKBH3Q96Q83 286 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-214ENST00000486311 TNFRSF13CQ96RJ3 184 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 LINC00470Q9BZP3 86 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 C12orf10Q9HB07 376 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 CR1P17927 2039 aa19.56■□□□□ 0.72
SREBF1-214ENST00000486311 IGHV1-18A0A0C4DH31 117 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 A8MV72 311 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-214ENST00000486311 C5orf58C9J3I9 102 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 UPK3AO75631 287 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 ETS2P15036 469 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 PRKAR1BP31321 381 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 STX1BP61266 288 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 SWI5Q1ZZU3 235 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 MST1LQ2TV78 715 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 TMEM249Q2WGJ8 235 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 LRIF1Q5T3J3 769 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 LINGO2Q7L985 606 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 MAGEE2Q8TD90 523 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-214ENST00000486311 FAM168AQ92567 244 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 SLC25A36Q96CQ1 311 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 KTI12Q96EK9 354 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-214ENST00000486311 SLC38A2Q96QD8 506 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms