RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SGK494L7N484 410 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 M0QZ92 97 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 UPK1AO00322 258 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 DSCR3O14972 297 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 TIMM8AO60220 97 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OR10H3O60404 316 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 MRPS14O60783 128 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 DUSP11O75319 330 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 B3GAT3O94766 335 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ESRRBO95718 433 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 TSPAN12O95859 305 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 FADS2O95864 444 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 CST4P01036 141 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OCM2P0CE71 109 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 SAGP10523 405 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 NR2F6P10588 404 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 HAPLN1P10915 354 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 FGF5P12034 268 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 CDH1P12830 882 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF12P17014 697 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF182P17025 639 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 EPHX2P34913 555 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 PTGER4P35408 488 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 RGS6P49758 472 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 GSK3BP49841 420 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 STK19P49842 368 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 P2RY4P51582 365 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 CCR8P51685 355 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF140P52738 457 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 PGGT1BP53609 377 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OR2B6P58173 313 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 MLF1P58340 268 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 FAM3BP58499 235 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 GABARAPL2P60520 117 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 RPL15P61313 204 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 AP1S1P61966 158 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ERVK-8P63133 956 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 IRF8Q02556 426 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 EGR4Q05215 589 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 DSC1Q08554 894 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 SLC10A7Q0GE19 358 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 HYAL1Q12794 435 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 FOXI1Q12951 378 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ALKBH1Q13686 389 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 FGFBP1Q14512 234 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ACOX1Q15067 660 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OR4D1Q15615 310 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 HIST2H2ACQ16777 129 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM44Q2T9K0 475 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 FAM174BQ3ZCQ3 159 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 GTDC1Q4AE62 458 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM35AQ53FP2 167 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 CYBRD1Q53TN4 286 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM196Q5HYL7 178 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 MS4A13Q5J8X5 152 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 SIRPB2Q5JXA9 342 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 RBM48Q5RL73 367 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 HACD4Q5VWC8 232 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 NIPAL3Q6P499 406 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 VWA1Q6PCB0 445 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ULK3Q6PHR2 472 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF773Q6PK81 442 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 LRRN1Q6UXK5 716 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF562Q6V9R5 426 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 SLC16A9Q7RTY1 509 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 CTU1Q7Z7A3 348 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 LHFPL4Q7Z7J7 247 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ADGRD2Q7Z7M1 963 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF546Q86UE3 836 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 GPAT4Q86UL3 456 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ADIPOR2Q86V24 386 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 GPALPP1Q8IXQ4 340 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 CYP4Z2PQ8N1L4 340 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 SPATA6LQ8N4H0 392 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM199Q8N511 208 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 DHRSXQ8N5I4 330 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ATP6V0D2Q8N8Y2 350 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 FAM46DQ8NEK8 389 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OR8J3Q8NGG0 315 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OR2L8Q8NGY9 312 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OR4L1Q8NH43 312 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 WIPF2Q8TF74 440 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ASB5Q8WWX0 329 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ACOT11Q8WXI4 607 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 PPWD1Q96BP3 646 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 C12orf43Q96C57 262 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 MSI2Q96DH6 328 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 PABPC5Q96DU9 382 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OTUB1Q96FW1 271 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 PACRGQ96M98 296 aaPredicted RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF382Q96SR6 550 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 SEPHS2Q99611 448 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 PRRT1Q99946 306 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 UTP23Q9BRU9 249 aaKnown RBP3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 FEM1AQ9BSK4 669 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 COPS4Q9BT78 406 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 METTL9Q9H1A3 318 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 OR2AG1Q9H205 316 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 SEMA6AQ9H2E6 1030 aa3.66□□□□□ -1.82
PRPF38B-205ENST00000485810 RPF2Q9H7B2 306 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms