RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 MFSD12Q6NUT3 480 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ARHGAP11AQ6P4F7 1023 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 RPL22L1Q6P5R6 122 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ABHD17CQ6PCB6 329 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 GSG1LQ6UXU4 331 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 TMUB2Q71RG4 321 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 LINGO2Q7L985 606 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 KANSL1Q7Z3B3 1105 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SZRD1Q7Z422 152 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 UBE2Q1Q7Z7E8 422 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 CDH26Q8IXH8 852 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PDZD9Q8IXQ8 264 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 C7orf61Q8IZ16 206 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 AMER3Q8N944 861 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DTX3Q8N9I9 347 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 LMNTD1Q8N9Z9 388 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DNAAF1Q8NEP3 725 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 OR2L5Q8NG80 312 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 OR5M9Q8NGP3 310 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 OR5AR1Q8NGP9 310 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 OR2T27Q8NH04 317 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 OR52I2Q8NH67 350 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF671Q8TAW3 534 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 WFIKKN2Q8TEU8 576 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 POF1BQ8WVV4 589 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PCNPQ8WW12 178 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 TMEM239Q8WW34 195 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SMPDL3BQ92485 455 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 TFGQ92734 400 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 EDAQ92838 391 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PMM1Q92871 262 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 RIT1Q92963 219 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MARC2Q969Z3 335 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DACT3Q96B18 629 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MRPS24Q96EL2 167 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PELI1Q96FA3 418 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MRPL48Q96GC5 212 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 C16orf58Q96GQ5 468 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PEX11GQ96HA9 241 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 HHIPL1Q96JK4 782 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ART5Q96L15 291 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF681Q96N22 645 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 CNN2Q99439 309 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 TEAD3Q99594 435 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 GFI1Q99684 422 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SEC22CQ9BRL7 303 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 G6PC3Q9BUM1 346 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF426Q9BUY5 554 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 RAB11FIP5Q9BXF6 653 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 GSDMCQ9BYG8 508 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF350Q9GZX5 532 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 QRSL1Q9H0R6 528 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC25A32Q9H2D1 315 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 TTYH1Q9H313 450 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 CDCP1Q9H5V8 836 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MTHFD2LQ9H903 347 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 CACYBPQ9HB71 228 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 BARX1Q9HBU1 254 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 NOX3Q9HBY0 568 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 KLHL1Q9NR64 748 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 C14orf105Q9NVL8 296 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ANKRD10Q9NXR5 420 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 OR6C2Q9NZP2 312 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MED11Q9P086 117 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SERTAD3Q9UJW9 196 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 FBXO9Q9UK97 447 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC7A7Q9UM01 511 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PLAGL1Q9UM63 463 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 FOXJ3Q9UPW0 622 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SIGLEC7Q9Y286 467 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ASF1AQ9Y294 204 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 KCNE3Q9Y6H6 103 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DOCK3Q8IZD9 2030 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 TBC1D3KA0A087X1G2 549 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 A0A0B4J203 849 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 IGKV1-8A0A0C4DH67 115 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 FEZF1A0PJY2 475 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 UBE2QL1A1L167 161 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 TBC1D3BA6NDS4 549 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 TBC1D3FA6NER0 549 aaPredicted RBP4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 GPR89AB7ZAQ6 455 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 C4orf51C9J302 202 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 F5H5P2 479 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 J3QLW9 94 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 K7ESM1 405 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 ETV2O00321 342 aaPredicted RBP4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 PIN1P1O15428 100 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 OR1F1O43749 312 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 EIF4E2O60573 245 aaKnown RBP4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 PRAMEF2O60811 474 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 CTNSO60931 367 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 SDC3O75056 442 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 PTP4A3O75365 173 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 KHDRBS3O75525 346 aaKnown RBP4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 PRKRAO75569 313 aaKnown RBP4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 TOXO94900 526 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 DBIP07108 87 aaKnown RBP4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 GUSBP08236 651 aa4.29□□□□□ -1.72
SMARCC1-206ENST00000485737 ADRB1P08588 477 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms