RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 BEX2Q9BXY8 128 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 TPT1P8Q9HAU6 139 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 THAP1Q9NVV9 213 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 TRPC5OSA6NMA1 111 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 ZNF587BE7ETH6 402 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 NR5A2O00482 541 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 NPIPB7O75200 414 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 SNNO75324 88 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-205ENST00000485397 UPK3AO75631 287 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 ANP32DO95626 131 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 IL6P05231 212 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 NCF2P19878 526 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-205ENST00000485397 TUBA1BP68363 451 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 TUBA4AP68366 448 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 LSM11P83369 360 aaKnown RBP eCLIP16.76■□□□□ 0.278e-20■■■□□ 18.4
COL27A1-205ENST00000485397 RNF220Q5VTB9 566 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 PRAMEF8Q5VWM4 474 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 PRAMEF7Q5VXH5 474 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 NIPAL3Q6P499 406 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 TUBA1AQ71U36 451 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 ABHD12BQ7Z5M8 362 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-205ENST00000485397 SERPINA11Q86U17 422 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 KDM8Q8N371 416 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 ARIH2OSQ8N7S6 290 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 BCL2L2Q92843 193 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-205ENST00000485397 C3orf49Q96BT1 292 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 SLC38A2Q96QD8 506 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 SPATA9Q9BWV2 254 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 OBP2BQ9NPH6 170 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 TMEM160Q9NX00 188 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 CALML5Q9NZT1 146 aa16.76■□□□□ 0.27
COL27A1-205ENST00000485397 A0A096LPE4 126 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 A0A1W2PPZ6 126 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 VWC2LB2RUY7 222 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 VAMP5O95183 116 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 ZCCHC18P0CG32 403 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 IDO1P14902 403 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 PDLIM4P50479 330 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 UBE2NP61088 152 aaKnown RBP16.75■□□□□ 0.27
COL27A1-205ENST00000485397 HOXC5Q00444 222 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 GGTLC2Q14390 218 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 LARS2Q15031 903 aaKnown RBP16.75■□□□□ 0.27
COL27A1-205ENST00000485397 SLC9B1Q4ZJI4 515 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 ATG16L1Q676U5 607 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 ANKS4BQ8N8V4 417 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 VPS33AQ96AX1 596 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 SEC61A2Q9H9S3 476 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 RASD1Q9Y272 281 aa16.75■□□□□ 0.27
COL27A1-205ENST00000485397 TMEM229AB2RXF0 380 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 LMX1BO60663 402 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 NUDT7P0C024 238 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 SERPINF1P36955 418 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 SNRPD2P62316 118 aaKnown RBP16.74■□□□□ 0.27
COL27A1-205ENST00000485397 CARTPTQ16568 116 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 ANKRD16Q6P6B7 361 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 VHLLQ6RSH7 139 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 OR9I1Q8NGQ6 314 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 STK35Q8TDR2 534 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 SLC25A36Q96CQ1 311 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 MAELQ96JY0 434 aaKnown RBP16.74■□□□□ 0.27
COL27A1-205ENST00000485397 VRK1Q99986 396 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-205ENST00000485397 KCNS3Q9BQ31 491 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 PTDSS2Q9BVG9 487 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 SHARPINQ9H0F6 387 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 NELFAQ9H3P2 528 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 CA10Q9NS85 328 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 ZIM2Q9NZV7 527 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 ZNF232Q9UNY5 417 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 FKBP7Q9Y680 259 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 MXRA5Q9NR99 2828 aa16.74■□□□□ 0.27
COL27A1-205ENST00000485397 A0A096LPI6 279 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 A0A0G2JPF8 293 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 TMEM120BA0PK00 339 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 HNRNPCL2B2RXH8 293 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 HNRNPCL3B7ZW38 293 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 FTCDNL1E5RQL4 147 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 HNRNPCL1O60812 293 aaKnown RBP16.73■□□□□ 0.27
COL27A1-205ENST00000485397 AHSA1O95433 338 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 CRYAAP02489 173 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 CECR9P0C854 216 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 HNRNPCL4P0DMR1 293 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 PNMTP11086 282 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 NR4A2P43354 598 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 GZMKP49863 264 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 NAAAQ02083 359 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 EGR4Q05215 589 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 ZSWIM7Q19AV6 140 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 ZNF311Q5JNZ3 666 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 SLC46A3Q7Z3Q1 461 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 MAVSQ7Z434 540 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 MFSD8Q8NHS3 518 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 ITCHQ96J02 903 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 FOXN4Q96NZ1 517 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 PIMREGQ9BSJ6 248 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 KATNB1Q9BVA0 655 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 PRR14Q9BWN1 585 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 RMND5AQ9H871 391 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 CRNNQ9UBG3 495 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms