RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 PRSS27Q9BQR3 290 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 OR51M1Q9H341 326 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 KLF15Q9UIH9 416 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 CARHSP1Q9Y2V2 147 aaKnown RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 SLC22A7Q9Y694 548 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 KIAA0100Q14667 2235 aaKnown RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 OR14I1A6ND48 311 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 POP7O75817 140 aaKnown RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 S100A8P05109 93 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 GUCA2AQ02747 115 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 TGM3Q08188 693 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 LRRC37A5PQ49AS3 106 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 YOD1Q5VVQ6 348 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 USP53Q70EK8 1073 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 FAM122BQ7Z309 247 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 ANKRD33Q7Z3H0 272 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 NUDT13Q86X67 352 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 BEST3Q8N1M1 668 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 TRAM1L1Q8N609 369 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 OR13C2Q8NGS9 318 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 OVCA2Q8WZ82 227 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 CPEB1Q9BZB8 566 aaKnown RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 ZNF334Q9HCZ1 680 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 APMAPQ9HDC9 416 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 TNFSF18Q9UNG2 199 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 V9GY05 133 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 BRCA2P51587 3418 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 RNF222A6NCQ9 220 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ANKRD61A6NGH8 418 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 C5orf52A6NGY3 159 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 IDSB3KWA1 339 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ZNF879B4DU55 563 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 GLSO94925 669 aaPredicted RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 IGHV2-70P01814 119 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 STATHP02808 62 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 RAB40ALP0C0E4 278 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 NAA10P41227 235 aaPredicted RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 GPR143P51810 404 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 PDX1P52945 283 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 GLT8D1Q68CQ7 371 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 KRT77Q7Z794 578 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 SDR9C7Q8NEX9 313 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 OR51L1Q8NGJ5 315 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 OR6N1Q8NGY5 312 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 RAB40AQ8WXH6 277 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 DVL3Q92997 716 aaPredicted RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 GLYATL1Q969I3 302 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 TIFAQ96CG3 184 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ZNF689Q96CS4 500 aaPredicted RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 EXO5Q9H790 373 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 KLHL28Q9NXS3 571 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 GNG8Q9UK08 70 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ZNF223Q9UK11 482 aaPredicted RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 TRAV27A0A087WT01 109 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 TMEM82A0PJX8 343 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 OR5H14A6NHG9 310 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 COLCA2A8K830 154 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 GATCO43716 136 aaKnown RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 CTNSO60931 367 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 RBBP9O75884 186 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 PPP1R3DO95685 299 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 S100A6P06703 90 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 AGTR1P30556 359 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ANXA11P50995 505 aaKnown RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ACTC1P68032 377 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ACTA1P68133 377 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ZNF658BQ4V348 819 aaPredicted RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 Q6ZVU0 165 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 NAA40Q86UY6 237 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 C12orf40Q86WS4 652 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ARL14EPQ8N8R7 260 aaPredicted RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 STEAP2Q8NFT2 490 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 PAQR8Q8TEZ7 354 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 MYLIPQ8WY64 445 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 MIB2Q96AX9 1013 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 OTUB2Q96DC9 234 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 ARSGQ96EG1 525 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 RHBGQ9H310 441 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 POFUT1Q9H488 388 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 C2orf42Q9NWW7 574 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 CLDND1Q9NY35 253 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 MBD2Q9UBB5 411 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 GHRLQ9UBU3 117 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 TAC3Q9UHF0 121 aa10.84□□□□□ -0.67
VTI1A-205ENST00000483122 MDC1Q14676 2089 aaKnown RBP10.84□□□□□ -0.67
VTI1A-205ENST00000483122 TCF20Q9UGU0 1960 aaKnown RBP10.83□□□□□ -0.68
VTI1A-205ENST00000483122 CCDC85CA6NKD9 419 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 RIIAD1A6NNX1 92 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 H7C417 338 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 NDUFS4O43181 175 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 FADS1O60427 444 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ABOP16442 354 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 HTR2AP28223 471 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 FAUP35544 74 aaKnown RBP10.83□□□□□ -0.68
VTI1A-205ENST00000483122 SLC11A1P49279 550 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 RAB5BP61020 215 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ST8SIA6P61647 398 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 UNQ6126/PRO20091Q6UXV3 157 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms