RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 UBASH3BQ8TF42 649 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 NEU4Q8WWR8 484 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 OIT3Q8WWZ8 545 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 BCL2L2Q92843 193 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 TUBGCP3Q96CW5 907 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 BOD1Q96IK1 185 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 MECRQ9BV79 373 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 SF3B5Q9BWJ5 86 aaKnown RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 METTL17Q9H7H0 456 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 SEC61A2Q9H9S3 476 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 EXOSC3Q9NQT5 275 aaKnown RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 POLE3Q9NRF9 147 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 ZDHHC2Q9UIJ5 367 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 PCDHB14Q9Y5E9 798 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 A0A0A6YYJ9 748 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 PRSS51A0A1B0GVH4 220 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ERICH4A6NGS2 130 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 LIPT2A6NK58 231 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 AQP7P3A6NL99 342 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 B4DSR2 109 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF587BE7ETH6 402 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 SLCO1B7G3V0H7 640 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 H0YHG0 523 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 RNASET2O00584 256 aaKnown RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 KCNAB3O43448 404 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 UPK3AO75631 287 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 RGS9O75916 674 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 IGLV1-44P01699 117 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 C1QCP02747 245 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 GPIP06744 558 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 IGFBP1P08833 259 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 CELA3BP08861 270 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ADRA2AP08913 450 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 CCDC159P0C7I6 412 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 NPR2P20594 1047 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 PCMT1P22061 227 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 UQCRC2P22695 453 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 CXCR1P25024 350 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ARRB2P32121 409 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 SELENOPP49908 381 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 MAP2K6P52564 334 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ACTG1P63261 375 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 EMX2Q04743 252 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 BNIP2Q12982 314 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 RIN1Q13671 783 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ADRM1Q16186 407 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 SYPL1Q16563 259 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 UGT2A3Q6UWM9 527 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 CREB3L2Q70SY1 520 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 LINGO2Q7L985 606 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 GSPT2Q8IYD1 628 aaKnown RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ANKFN1Q8N957 763 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF511Q8NB15 262 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 NUP37Q8NFH4 326 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 EPS8L3Q8TE67 593 aaKnown RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ZFAND2BQ8WV99 257 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 WDR60Q8WVS4 1066 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 GCDHQ92947 438 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ALKBH3Q96Q83 286 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF442Q9H7R0 627 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 SRA1Q9HD15 236 aaKnown RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 DYNLRB1Q9NP97 96 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ADPRHL2Q9NX46 363 aa6.39□□□□□ -1.39
CSDE1-206ENST00000483030 CRNNQ9UBG3 495 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-206ENST00000483030 ARPC4-TTLL3A0A0A6YYG9 625 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 CFAP73A6NFT4 308 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 AGAP5A6NIR3 686 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 OR6C65A6NJZ3 312 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 HMGN4O00479 90 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 FAAHO00519 579 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 CBR1P16152 277 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 IL7RP16871 459 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 CHI3L1P36222 383 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 KHKP50053 298 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 P2RY4P51582 365 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 HPCAP84074 193 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 ARF1P84077 181 aaKnown RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 IL1RL1Q01638 556 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 ROR2Q01974 943 aaKnown RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 EPS8Q12929 822 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 TMED1Q13445 227 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 GSTA3Q16772 222 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 C3orf36Q3SXR2 165 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 ANXA8L1Q5VT79 327 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 SAXO2Q658L1 398 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 NIPAL3Q6P499 406 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 MYPOPQ86VE0 399 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 GLCCI1Q86VQ1 547 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 CARM1Q86X55 608 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 EPHX4Q8IUS5 362 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 CMIPQ8IY22 773 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 CDK20Q8IZL9 346 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 KDM8Q8N371 416 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 FAM169BQ8N8A8 192 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 SEMA6DQ8NFY4 1073 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 OR8J2Q8NGG1 315 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 SVIPQ8NHG7 77 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 SGMS2Q8NHU3 365 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 MAGEE2Q8TD90 523 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF418Q8TF45 676 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms