RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 UNC119BA6NIH7 251 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 FIGNL2A6NMB9 653 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 M0R082 166 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 CDC42EP2O14613 210 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 KLF4O43474 513 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 WDR1O75083 606 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 ATP6V1G2O95670 118 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 ADAP00813 363 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 ASAH2BP0C7U1 165 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 GABRA1P14867 456 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 KLK2P20151 261 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 FPR3P25089 353 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 GSSP48637 474 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 SLC9A3P48764 834 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 TLE1Q04724 770 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 SLC34A1Q06495 639 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 TSPAN31Q12999 210 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 PMS2P3Q13401 168 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 PON3Q15166 354 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 TRIP10Q15642 601 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 ZNF239Q16600 458 aaKnown RBP10.95□□□□□ -0.66
SDC1-206ENST00000482879 PAQR6Q6TCH4 344 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 PLXDC2Q6UX71 529 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 Q6ZPB1 254 aaPredicted RBP10.95□□□□□ -0.66
SDC1-206ENST00000482879 P4HA3Q7Z4N8 544 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 NANOGNBQ7Z5D8 188 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 OAFQ86UD1 273 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 DOLPP1Q86YN1 238 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 EPHX4Q8IUS5 362 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 SCAIQ8N9R8 606 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 OR13C2Q8NGS9 318 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 OR5J2Q8NH18 312 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 OR51A7Q8NH64 312 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 ZNF417Q8TAU3 575 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 EME1Q96AY2 570 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 UCN2Q96RP3 112 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 TRIB1Q96RU8 372 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 ZNF587Q96SQ5 575 aaPredicted RBP10.95□□□□□ -0.66
SDC1-206ENST00000482879 NIPSNAP1Q9BPW8 284 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 C9orf16Q9BUW7 83 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 ZNF556Q9HAH1 456 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 SMURF2Q9HAU4 748 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 CHST11Q9NPF2 352 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 MRPL39Q9NYK5 338 aaKnown RBP10.95□□□□□ -0.66
SDC1-206ENST00000482879 KIF17Q9P2E2 1029 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 SEC14L4Q9UDX3 406 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 B3GALT5Q9Y2C3 310 aa10.95□□□□□ -0.66
SDC1-206ENST00000482879 TRAV27A0A087WT01 109 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 SLC22A20A6NK97 555 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 ZNF814B7Z6K7 855 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 BLOC1S5-TXNDC5H3BN57 136 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 PLPP3O14495 311 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 SMAD9O15198 467 aaKnown RBP10.94□□□□□ -0.66
SDC1-206ENST00000482879 FZD7O75084 574 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 C1QL1O75973 258 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 OR6A2O95222 327 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 HOXD4P09016 255 aaPredicted RBP10.94□□□□□ -0.66
SDC1-206ENST00000482879 GSTM3P21266 225 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 ACVR2AP27037 513 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 PTGER4P35408 488 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 DAPP51397 102 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 CASP6P55212 293 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 H3F3AP84243 136 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 IL1RL1Q01638 556 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 ZBED5Q49AG3 693 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 ACSF3Q4G176 576 aaPredicted RBP10.94□□□□□ -0.66
SDC1-206ENST00000482879 C1orf185Q5T7R7 199 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 LPCAT4Q643R3 524 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 TMEM225Q6GV28 225 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 FAHD1Q6P587 224 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 RPTNQ6XPR3 784 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 ZBTB49Q6ZSB9 765 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 FCRLAQ7L513 359 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 ADGRE4PQ86SQ3 457 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 CCDC103Q8IW40 242 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 CBR4Q8N4T8 237 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 FNDC9Q8TBE3 224 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 TNFRSF13CQ96RJ3 184 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 UCK2Q9BZX2 261 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 GABARAPL1Q9H0R8 117 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 TP63Q9H3D4 680 aaPredicted RBP10.94□□□□□ -0.66
SDC1-206ENST00000482879 CALHM2Q9HA72 323 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 SH3BGRL2Q9UJC5 107 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 RALYQ9UKM9 306 aaKnown RBP10.94□□□□□ -0.66
SDC1-206ENST00000482879 ZNF175Q9Y473 711 aa10.94□□□□□ -0.66
SDC1-206ENST00000482879 DIDO1Q9BTC0 2240 aaKnown RBP10.94□□□□□ -0.66
SDC1-206ENST00000482879 CHD6Q8TD26 2715 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 CD8B2A6NJW9 211 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 AQP7P3A6NL99 342 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 KDM4EB2RXH2 506 aaPredicted RBP10.93□□□□□ -0.66
SDC1-206ENST00000482879 C11orf98E9PRG8 122 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 MS4A18H0YCH9 400 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 SOCS2O14508 198 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 RAMP1O60894 148 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 PTP4A3O75365 173 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 AQP8O94778 261 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 TGM6O95932 706 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 ADORA3P0DMS8 318 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 AHCYP23526 432 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 AQP2P41181 271 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms