RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 BCKDHAP12694 445 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 GCH1P30793 250 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 SOAT1P35610 550 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 SEC24CP53992 1094 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 ROR2Q01974 943 aaKnown RBP12.81□□□□□ -0.36
HDAC6-224ENST00000481929 CEACAM7Q14002 265 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 MAPK14Q16539 360 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 MSMPQ1L6U9 139 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 ARHGAP11BQ3KRB8 267 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 LIPMQ5VYY2 423 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 CLEC6AQ6EIG7 209 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 TMEM225Q6GV28 225 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 NIPAL3Q6P499 406 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 FRMD7Q6ZUT3 714 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 DOK3Q7L591 496 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 C16orf62Q7Z3J2 963 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 SYT14Q8NB59 555 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 OR2T11Q8NH01 316 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 EXOSC3Q9NQT5 275 aaKnown RBP12.81□□□□□ -0.36
HDAC6-224ENST00000481929 ZDHHC18Q9NUE0 388 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 ATAD3AQ9NVI7 634 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 ZDHHC2Q9UIJ5 367 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 ZC3H12DA2A288 527 aaKnown RBP12.8□□□□□ -0.36
HDAC6-224ENST00000481929 LIPT2A6NK58 231 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 CFLARO15519 480 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 ALX3O95076 343 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 MATN1P21941 496 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 CAPZA2P47755 286 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 MAP2K6P52564 334 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 ARF1P84077 181 aaKnown RBP12.8□□□□□ -0.36
HDAC6-224ENST00000481929 MVKQ03426 396 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 MAD2L1BPQ15013 274 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-224ENST00000481929 OR7A5Q15622 319 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 GALNTL6Q49A17 601 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 CFAP157Q5JU67 520 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 AVPI1Q5T686 147 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 TIFABQ6ZNK6 161 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 MDP1Q86V88 176 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 LSRQ86X29 649 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-224ENST00000481929 TREML1Q86YW5 311 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 LINC00470Q9BZP3 86 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 ZNF385DQ9H6B1 395 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 EXD2Q9NVH0 621 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 OPN4Q9UHM6 478 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 NOX1Q9Y5S8 564 aa12.8□□□□□ -0.36
HDAC6-224ENST00000481929 TMEM114B3SHH9 223 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 LSM1O15116 133 aaKnown RBP12.79□□□□□ -0.36
HDAC6-224ENST00000481929 SCN2BO60939 215 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-224ENST00000481929 VAMP5O95183 116 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 RNASE1P07998 156 aaKnown RBP12.79□□□□□ -0.36
HDAC6-224ENST00000481929 MYL2P10916 166 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 TACR3P29371 465 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 RPS23P62266 143 aaKnown RBP12.79□□□□□ -0.36
HDAC6-224ENST00000481929 BAMBIQ13145 260 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 CREB3L2Q70SY1 520 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 RELL1Q8IUW5 271 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 NATD1Q8N6N6 113 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 SLC25A28Q96A46 364 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 GPA33Q99795 319 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 POLE3Q9NRF9 147 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-224ENST00000481929 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
HDAC6-224ENST00000481929 WDR45Q9Y484 360 aa12.79□□□□□ -0.36
HDAC6-224ENST00000481929 ZNF503-AS2A6NEH8 195 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 TMEM229AB2RXF0 380 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 RPL36A-HNRNPH2H7BZ11 118 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 AP3D1O14617 1153 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 IGHV2-5P01817 119 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 MDKP21741 143 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-224ENST00000481929 GLRXP35754 106 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 ETF1P62495 437 aaKnown RBP12.78□□□□□ -0.36
HDAC6-224ENST00000481929 KCNJ10P78508 379 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 ATAD3BQ5T9A4 648 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 TYW3Q6IPR3 259 aaKnown RBP12.78□□□□□ -0.36
HDAC6-224ENST00000481929 ZYG11AQ6WRX3 759 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 C6orf120Q7Z4R8 191 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 CCDC36Q8IYA8 594 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 ANKK1Q8NFD2 765 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 RAB8BQ92930 207 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 SLC35G5Q96KT7 338 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 C1orf147Q96MC9 270 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-224ENST00000481929 TAPBPLQ9BX59 468 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 MYEF2Q9P2K5 600 aaKnown RBP12.78□□□□□ -0.36
HDAC6-224ENST00000481929 FIS1Q9Y3D6 152 aa12.78□□□□□ -0.36
HDAC6-224ENST00000481929 A0A1W2PPW3 197 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 CLDN24A6NM45 220 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 G3V2L1 256 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 CDC14BO60729 498 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF432O94892 652 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 CHEK2O96017 543 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 GUSBP08236 651 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 LINC00032P0C843 101 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 NAT2P11245 290 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 MAPK1P28482 360 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 PLAURQ03405 335 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 TRMT5Q32P41 509 aaKnown RBP12.77□□□□□ -0.37
HDAC6-224ENST00000481929 MMEL1Q495T6 779 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 GLIPR1L2Q4G1C9 344 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms