RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RGS8P57771 180 aaPredicted RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 RPL27P61353 136 aaKnown RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 TSC22D1Q15714 1073 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 TSEN54Q7Z6J9 526 aaKnown RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 NOA1Q8NC60 698 aaKnown RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 FAM98AQ8NCA5 519 aaKnown RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 LNX1Q8TBB1 728 aaPredicted RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 CNIH3Q8TBE1 160 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 DNASE2BQ8WZ79 361 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 TFGQ92734 400 aaPredicted RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 MRPL24Q96A35 216 aaKnown RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 ZNF274Q96GC6 653 aaPredicted RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 TNFRSF13CQ96RJ3 184 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 GABRG3Q99928 467 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 ATF6BQ99941 703 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 NAA50Q9GZZ1 169 aaKnown RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 IL25Q9H293 177 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 NRN1Q9NPD7 142 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 SCN1AP35498 2009 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 MUC6Q6W4X9 2439 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 PKHD1L1Q86WI1 4243 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 TRBV4-1A0A0J9YWV2 114 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 ZNF195O14628 629 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 SC5DO75845 299 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 OAZ2O95190 189 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 OR5F1O95221 314 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 IGHV4-31P0DP07 118 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 MCF2P10911 925 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 CD58P19256 250 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 CD1CP29017 333 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 RRM2P31350 389 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 SFTPDP35247 375 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 UQCRFS1P47985 274 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 CSRP3P50461 194 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 CSNK1G2P78368 415 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 DMRTC1Q5HYR2 192 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 GPBP1Q86WP2 473 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 KRTAP19-1Q8IUB9 90 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 C4orf32Q8N8J7 132 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 DNAAF3Q8N9W5 541 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 RNF149Q8NC42 400 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 FBXO36Q8NEA4 188 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 STXBP6Q8NFX7 210 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 OR4C15Q8NGM1 316 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 OR5M1Q8NGP8 315 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 C2orf15Q8WU43 125 aaKnown RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 RAB3CQ96E17 227 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 TAAR1Q96RJ0 339 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 NEURL2Q9BR09 285 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 ECHDC1Q9NTX5 307 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 IL20Q9NYY1 176 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 MYEF2Q9P2K5 600 aaKnown RBP2.84□□□□□ -1.95
SMC6-208ENST00000481708 MMP24Q9Y5R2 645 aa2.84□□□□□ -1.95
SMC6-208ENST00000481708 NCOA6Q14686 2063 aaPredicted RBP2.84□□□□□ -1.96
SMC6-208ENST00000481708 USP24Q9UPU5 2620 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 A0A1W2PRB8 838 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 A8MU76 341 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 CLOCKO15516 846 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 WBP4O75554 376 aaKnown RBP2.84□□□□□ -1.96
SMC6-208ENST00000481708 FCN3O75636 299 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 RFPL2O75678 378 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 APOA1P02647 267 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 SERPIND1P05546 499 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 TNFRSF1BP20333 461 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 BCKDHBP21953 392 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 UGT1A4P22310 534 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 NUMBP49757 651 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 EMP2P54851 167 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 ERVK-25P63136 954 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 ITGA9Q13797 1035 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 TRAM2Q15035 370 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 ZNF77Q15935 545 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 TPD52L1Q16890 204 aaPredicted RBP2.84□□□□□ -1.96
SMC6-208ENST00000481708 SLC35D3Q5M8T2 416 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 ZNF66Q6ZN08 573 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 ZNF836Q6ZNA1 936 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 FAM57BQ71RH2 274 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 PAGE2Q7Z2X7 111 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 VRK3Q8IV63 474 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 FBXL14Q8N1E6 418 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 PGBD5Q8N414 524 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 MS4A15Q8N5U1 240 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 RBMXL3Q8N7X1 1067 aaKnown RBP2.84□□□□□ -1.96
SMC6-208ENST00000481708 C8orf31Q8N9H6 132 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 OR13C5Q8NGS8 318 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 OR13C9Q8NGT0 318 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 OR52N5Q8NH56 324 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 C11orf45Q8TAV5 145 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 LINC00476Q8WZB0 136 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 BEX1Q9HBH7 125 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 POPDC2Q9HBU9 364 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 MED17Q9NVC6 651 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 ZNF319Q9P2F9 582 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 FZR1Q9UM11 496 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 PRELID1Q9Y255 219 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 SPTBN2O15020 2390 aa2.84□□□□□ -1.96
SMC6-208ENST00000481708 ZZEF1O43149 2961 aa2.83□□□□□ -1.96
SMC6-208ENST00000481708 KCNE1BA0A087WTH5 132 aa2.83□□□□□ -1.96
SMC6-208ENST00000481708 FABP12A6NFH5 140 aa2.83□□□□□ -1.96
SMC6-208ENST00000481708 SRRM3A6NNA2 597 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms