RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PLAUP00749 431 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 TP53P04637 393 aaPredicted RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 C8BP07358 591 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 ITGA5P08648 1049 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 CSF3P09919 207 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 HOXB9P17482 250 aaPredicted RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 RGS8P57771 180 aaPredicted RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 UBE2NP61088 152 aaKnown RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 LTBQ06643 244 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 SCARB2Q14108 478 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 TSC22D1Q15714 1073 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 CYP51A1Q16850 503 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 AGKQ53H12 422 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 RPS26P11Q5JNZ5 115 aaPredicted RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 HMGN2P46Q86SG4 172 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 ARMC8Q8IUR7 673 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 DPP10Q8N608 796 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 FAM169BQ8N8A8 192 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 KBTBD8Q8NFY9 601 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 OR52E4Q8NGH9 312 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 OR52N5Q8NH56 324 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 MAGEE2Q8TD90 523 aaPredicted RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 CKAP2Q8WWK9 683 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 ZNF775Q96BV0 537 aaPredicted RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 TRAF4Q9BUZ4 470 aaPredicted RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 SLCO1B3Q9NPD5 702 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 SLC17A5Q9NRA2 495 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 CBLN4Q9NTU7 201 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 FLNAP21333 2647 aaKnown RBP10.07□□□□□ -0.8
CCM2-213ENST00000480658 TRAV36DV7A0A075B6V5 113 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 LOC102725191A0A1B0GVB3 256 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 ZC3H12DA2A288 527 aaKnown RBP10.06□□□□□ -0.8
CCM2-213ENST00000480658 SLC43A1O75387 559 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 MT-ATP6P00846 226 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 NPPAP01160 153 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 IGHV3-9P01782 118 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 TROVE2P10155 538 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCM2-213ENST00000480658 TTKP33981 857 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 C1DQ13901 141 aaKnown RBP10.06□□□□□ -0.8
CCM2-213ENST00000480658 VEZF1Q14119 521 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 MAPRE2Q15555 327 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 CLEC12BQ2HXU8 276 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 GTDC1Q4AE62 458 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 TTMPQ5BVD1 217 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 COQ5Q5HYK3 327 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 HMBOX1Q6NT76 420 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 CREB3L2Q70SY1 520 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 DHDDSQ86SQ9 333 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 PATL1Q86TB9 770 aaKnown RBP10.06□□□□□ -0.8
CCM2-213ENST00000480658 FUNDC1Q8IVP5 155 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 MUC15Q8N387 334 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 CLIP4Q8N3C7 705 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 TMEM99Q8N816 258 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 PIK3C3Q8NEB9 887 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 LILRB1Q8NHL6 650 aaPredicted RBP10.06□□□□□ -0.8
CCM2-213ENST00000480658 NFKBIDQ8NI38 313 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 MAL2Q969L2 176 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 ZBTB9Q96C00 473 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 EBF4Q9BQW3 602 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 KATNB1Q9BVA0 655 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 ASPNQ9BXN1 380 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 B3GAT2Q9NPZ5 323 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 SLC7A10Q9NS82 523 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 SLC25A37Q9NYZ2 338 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 VAPAQ9P0L0 249 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 FBXL3Q9UKT7 428 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 PMF1-BGLAPU3KQ54 211 aa10.06□□□□□ -0.8
CCM2-213ENST00000480658 TRBV5-3A0A0A0MS03 114 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 ARPC4-TTLL3A0A0A6YYG9 625 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 BBIP1A8MTZ0 92 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 SHISA9B4DS77 424 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 RPL36A-HNRNPH2H7BZ11 118 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 H7C417 338 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 M0R1B8 84 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 PDE5AO76074 875 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 CRYAAP02489 173 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 ERCC1P07992 297 aaPredicted RBP10.05□□□□□ -0.8
CCM2-213ENST00000480658 SOD3P08294 240 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 RPS5P46782 204 aaKnown RBP10.05□□□□□ -0.8
CCM2-213ENST00000480658 ZNF83P51522 516 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 NUDT6P53370 316 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 CYLC2Q14093 348 aaPredicted RBP10.05□□□□□ -0.8
CCM2-213ENST00000480658 PGGHGQ32M88 737 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 TSPO2Q5TGU0 170 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 ANKRD16Q6P6B7 361 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 ZNF613Q6PF04 617 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 H1FNTQ75WM6 255 aaPredicted RBP10.05□□□□□ -0.8
CCM2-213ENST00000480658 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.05□□□□□ -0.8
CCM2-213ENST00000480658 IL17RDQ8NFM7 739 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 OXGR1Q96P68 337 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 RHNO1Q9BSD3 238 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 TMEM43Q9BTV4 400 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 MYOZ1Q9NP98 299 aaPredicted RBP10.05□□□□□ -0.8
CCM2-213ENST00000480658 NPAP1Q9NZP6 1156 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 FKBP7Q9Y680 259 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 HEATR5AQ86XA9 2040 aa10.05□□□□□ -0.8
CCM2-213ENST00000480658 ZNF469Q96JG9 3925 aaPredicted RBP10.05□□□□□ -0.8
CCM2-213ENST00000480658 NUP214P35658 2090 aaPredicted RBP10.05□□□□□ -0.8
CCM2-213ENST00000480658 MTORP42345 2549 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 A0A087WUJ7 227 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms