RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 BCAS1O75363 584 aaPredicted RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SLC43A1O75387 559 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 VAMP5O95183 116 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 OR6A2O95222 327 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 LGI1O95970 557 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 GUSBP08236 651 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 CSF3P09919 207 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 ALDOCP09972 364 aaKnown RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 HNRNPCL4P0DMR1 293 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 IGHV4-31P0DP07 118 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 PPIBP23284 216 aaKnown RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SLC6A2P23975 617 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 EDNRAP25101 427 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 CDKN2CP42773 168 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 RPS5P46782 204 aaKnown RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SLC16A1P53985 500 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 CLDN17P56750 224 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 PHC1P78364 1004 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SPOCK1Q08629 439 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 FUT5Q11128 374 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 PDCD4Q53EL6 469 aaKnown RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 HIKESHIQ53FT3 197 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 GCNT6Q5T4J0 391 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 TSPO2Q5TGU0 170 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 GKAP1Q5VSY0 366 aaPredicted RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 CARD17Q5XLA6 110 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 C11orf71Q6IPW1 123 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF544Q6NX49 715 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SNX32Q86XE0 403 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF525Q8N782 197 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 TMEM99Q8N816 258 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 FAM71CQ8NEG0 241 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 C1orf162Q8NEQ5 155 aaPredicted RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 BBS10Q8TAM1 723 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SLC26A7Q8TE54 656 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SLC38A5Q8WUX1 472 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF75CPQ92670 426 aaPredicted RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 TMEM19Q96HH6 336 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 TEX37Q96LM6 180 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 EPYCQ99645 322 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 PIMREGQ9BSJ6 248 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SF3B5Q9BWJ5 86 aaKnown RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 ASPNQ9BXN1 380 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 C20orf27Q9GZN8 174 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SAP130Q9H0E3 1048 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SHARPINQ9H0F6 387 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 HEATR1Q9H583 2144 aaKnown RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 CHODLQ9H9P2 273 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 TMEM27Q9HBJ8 222 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 MOV10Q9HCE1 1003 aaKnown RBP6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SLC17A5Q9NRA2 495 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SLC7A10Q9NS82 523 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 NPAP1Q9NZP6 1156 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 ZIM2Q9NZV7 527 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 CORO2BQ9UQ03 480 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 RASD1Q9Y272 281 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SPEF1Q9Y4P9 236 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 SLC25A15Q9Y619 301 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 ANK2Q01484 3957 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SH3PXD2BA1X283 911 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ZC3H12DA2A288 527 aaKnown RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SLC35F4A4IF30 521 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 CDHR4A6H8M9 788 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 PRORSD1PA6NEY8 169 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 AQP7P3A6NL99 342 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF726A6NNF4 738 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF716A6NP11 495 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 E7EQL1 145 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 CLIC1O00299 241 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ETV2O00321 342 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 AIM2O14862 343 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 FRS3O43559 492 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 OR2T1O43869 369 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 LMX1BO60663 402 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SERPINB7O75635 380 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 PGM3O95394 542 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 HIST1H2ABP04908 130 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ITGA5P08648 1049 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 PNMTP11086 282 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 CD79AP11912 226 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 IMPDH2P12268 514 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SLC25A16P16260 332 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF16P17020 682 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SRD5A1P18405 259 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 CBLP22681 906 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 AHCYP23526 432 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 IGFBP5P24593 272 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 APOBEC3AP31941 199 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SERPINF1P36955 418 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 PDLIM4P50479 330 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 EFNA4P52798 201 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SH3BGRP55822 239 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 RGS8P57771 180 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 HOXC5Q00444 222 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 GALK2Q01415 458 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ROR2Q01974 943 aaKnown RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 RUNX1T1Q06455 604 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 FADDQ13158 208 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SLC17A1Q14916 467 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 GABRA6Q16445 453 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms