RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 GKN3PP0CG01 181 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 GSTT2P0CG29 244 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 GSTT2BP0CG30 244 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SLC35E2P0CK97 266 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PRR23D2P0DMB1 279 aaPredicted RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SLC2A2P11168 524 aaPredicted RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PRG2P13727 222 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF3P17036 446 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HK1P19367 917 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 MAKP20794 623 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TBXA2RP21731 343 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 DRD5P21918 477 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 S100A1P23297 94 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 F8A1P23610 371 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 MYL9P24844 172 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HLA-DMAP28067 261 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SLC6A6P31641 620 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 GABRA3P34903 492 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TGM4P49221 684 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 INPP1P49441 399 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 EVX1P49640 407 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PSMD4P55036 377 aaKnown RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ID2Q02363 134 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 MGAT2Q10469 447 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ADAM15Q13444 863 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HTR4Q13639 388 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 IL18Q14116 193 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 GALEQ14376 348 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SF3A2Q15428 464 aaKnown RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ZNHIT3Q15649 155 aaPredicted RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TAB1Q15750 504 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 MAPK14Q16539 360 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 GFOD2Q3B7J2 385 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PLEKHN1Q494U1 663 aaPredicted RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ZFP69Q49AA0 526 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TRMT12Q53H54 448 aaKnown RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ATAD3CQ5T2N8 411 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CCNJQ5T5M9 372 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HACD4Q5VWC8 232 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HBMQ6B0K9 141 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ARMC6Q6NXE6 501 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM53Q6P2H8 277 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PLBD1Q6P4A8 553 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ARHGAP11AQ6P4F7 1023 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PAMR1Q6UXH9 720 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 WDR88Q6ZMY6 472 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 OVCH1Q7RTY7 1134 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF550Q7Z398 422 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ABI3BPQ7Z7G0 1075 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TPRA1Q86W33 373 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 OOSP2Q86WS3 158 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 LRRC28Q86X40 367 aaPredicted RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 OR4N4Q8N0Y3 316 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CSNK1A1LQ8N752 337 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SLC37A3Q8NCC5 494 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 BBS1Q8NFJ9 593 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 OR4C6Q8NH72 309 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PFN4Q8NHR9 129 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CCL4L1Q8NHW4 92 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ADAMTS18Q8TE60 1221 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CAPSLQ8WWF8 208 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 FAM3CQ92520 227 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SLC7A6Q92536 515 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 FBXW5Q969U6 566 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 NACC2Q96BF6 587 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CTHRC1Q96CG8 243 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 BPIFA2Q96DR5 249 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 MRGPRX1Q96LB2 322 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 KCNJ15Q99712 375 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CCDC3Q9BQI4 270 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 NDC1Q9BTX1 674 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 LMF2Q9BU23 707 aaKnown RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 IFT27Q9BW83 186 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HDHD5Q9BXW7 423 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 C11orf54Q9H0W9 315 aaPredicted RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 S1PR5Q9H228 398 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 RERGLQ9H628 205 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PPP1R3EQ9H7J1 279 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 RNF121Q9H920 327 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TRPV5Q9NQA5 729 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 DDX28Q9NUL7 540 aaKnown RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 AP5S1Q9NUS5 200 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 RBFOX1Q9NWB1 397 aaKnown RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HRASLS2Q9NWW9 162 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 BABAM2Q9NXR7 383 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HAO2Q9NYQ3 351 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 COMMD3Q9UBI1 195 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 KLHL21Q9UJP4 597 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SIGLEC7Q9Y286 467 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CA5BQ9Y2D0 317 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SLC35A3Q9Y2D2 325 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 MRPS2Q9Y399 296 aaKnown RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 N6AMT1Q9Y5N5 214 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 F5P12259 2224 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 NPIPA5A0A0B4J1W7 369 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 LINC00854A0A1B0GVQ3 168 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 A0A1B0GWA3 101 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 GXYLT2A0PJZ3 443 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SMIM30A4D0T7 59 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 OR5K3A6NET4 321 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms