RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 SHHQ15465 462 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 MED22Q15528 200 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 TEAD2Q15562 447 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 TRAM1Q15629 374 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 COL28A1Q2UY09 1125 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CCDC58Q4VC31 144 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ARMC12Q5T9G4 340 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 TRIQKQ629K1 86 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ACSM2BQ68CK6 577 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 FAM109BQ6ICB4 259 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ANKRD54Q6NXT1 300 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CD200R1LQ6Q8B3 271 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 SUSD1Q6UWL2 747 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 FAM131AQ6UXB0 335 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CASP12Q6UXS9 341 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 LINGO4Q6UY18 593 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 TPGS1Q6ZTW0 290 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 MTSS1LQ765P7 747 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 PTOV1Q86YD1 416 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CCDC71Q8IV32 467 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 FOXRED2Q8IWF2 684 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 PIANPQ8IYJ0 282 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 HS3ST5Q8IZT8 346 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CIARTQ8N365 385 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 KRTCAP2Q8N6L1 136 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ZNF557Q8N988 423 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 FAM83FQ8NEG4 500 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 HCAR2Q8TDS4 363 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 DEDD2Q8WXF8 326 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 UBE2E3Q969T4 207 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 TCEAL4Q96EI5 215 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 C11orf24Q96F05 449 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 DIRAS2Q96HU8 199 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 RNF170Q96K19 258 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CMTM3Q96MX0 182 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 SDHCQ99643 169 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 SOSTQ9BQB4 213 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CCM2Q9BSQ5 444 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 FUZQ9BT04 418 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CENPOQ9BU64 300 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 TRMT61BQ9BVS5 477 aaKnown RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 BBS2Q9BXC9 721 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 GPR63Q9BZJ6 419 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 OR51E2Q9H255 320 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 TTYH1Q9H313 450 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 PIGUQ9H490 435 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ESRP2Q9H6T0 727 aaKnown RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 POLE4Q9NR33 117 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 EXD2Q9NVH0 621 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 DNAJC11Q9NVH1 559 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 PAQR5Q9NXK6 330 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ZNF226Q9NYT6 803 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 AKAP7Q9P0M2 348 aaPredicted RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ATP6V1HQ9UI12 483 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 TINAGQ9UJW2 476 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ANGPT4Q9Y264 503 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 LSM2Q9Y333 95 aaKnown RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 RBMX2Q9Y388 322 aaKnown RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 EXOSC1Q9Y3B2 195 aaKnown RBP4.12□□□□□ -1.75
LMBR1-216ENST00000477983 PPIL1Q9Y3C6 166 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 CSNK1G3Q9Y6M4 447 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ENPP4Q9Y6X5 453 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 V9GYH0 126 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 ANAPC1Q9H1A4 1944 aa4.12□□□□□ -1.75
LMBR1-216ENST00000477983 KIAA0100Q14667 2235 aaKnown RBP4.11□□□□□ -1.75
LMBR1-216ENST00000477983 IGLV3-16A0A075B6K0 115 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 KCNE1BA0A087WTH5 132 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 GLYATL1P3A0A0U1RQE8 302 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 FAM240BA0A1B0GVZ2 78 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 TRDV1A0A1B0GX56 115 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 A0A1W2PRB8 838 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 A0A1W2PS18 150 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 MGAT4DA6NG13 374 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 OR6C70A6NIJ9 312 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 C5orf67F2Z3F1 127 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 hCG_2039718K7EN88 272 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 CTDSP2O14595 271 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 MYL12BO14950 172 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 CASC3O15234 703 aaKnown RBP4.11□□□□□ -1.75
LMBR1-216ENST00000477983 OR2B3O76000 313 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 TPPPO94811 219 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 GADD45GO95257 159 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 FGF19O95750 216 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 RAB36O95755 333 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 WDPCPO95876 746 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 PTHP01270 115 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 TRBC1P01850 177 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 AMBPP02760 352 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 HLA-DPB1P04440 258 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 IFNW1P05000 195 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 HEXAP06865 529 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 HNRNPA1P09651 372 aaKnown RBP eCLIP4.11□□□□□ -1.75
LMBR1-216ENST00000477983 TSPAN19P0C672 248 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 HSMCR30P0CW71 290 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 SLC2A2P11168 524 aaPredicted RBP4.11□□□□□ -1.75
LMBR1-216ENST00000477983 HLA-DOBP13765 273 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 MYL12AP19105 171 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 AGAP20933 346 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 CBLP22681 906 aa4.11□□□□□ -1.75
LMBR1-216ENST00000477983 ALDH4A1P30038 563 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms