RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 LIN7AO14910 233 aaPredicted RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 KIAA0513O60268 411 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 ATP6AP2O75787 350 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 VENTXO95231 258 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 ACSL3O95573 720 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 EPOP01588 193 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 SLC4A1P02730 911 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 RPN2P04844 631 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 ATP1B2P14415 290 aaPredicted RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 SLC25A16P16260 332 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 IGFBP5P24593 272 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 PDHA2P29803 388 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 PCGF2P35227 344 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 HNF4AP41235 474 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 PRKCIP41743 596 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 MAGEA5P43359 124 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 NSFP46459 744 aaKnown RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 CAPZA2P47755 286 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 LMO4P61968 165 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 GUCY2DQ02846 1103 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 RELAQ04206 551 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 CUL3Q13618 768 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 NRF1Q16656 503 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 KRT71Q3SY84 523 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 ACSF3Q4G176 576 aaPredicted RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 BOLA3Q53S33 107 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 SFT2D3Q587I9 215 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 BEX5Q5H9J7 111 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 CCDC122Q5T0U0 273 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 TAF3Q5VWG9 929 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 LRRC8BQ6P9F7 803 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 ZBTB49Q6ZSB9 765 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 LANCL3Q6ZV70 420 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 CENPVQ7Z7K6 275 aaPredicted RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 PHF13Q86YI8 300 aaPredicted RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 TMEM251Q8N6I4 163 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 ARIH2OSQ8N7S6 290 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 OR5AR1Q8NGP9 310 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 OR6S1Q8NH40 331 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 PROX1Q92786 737 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 CAPZA3Q96KX2 299 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 C4orf45Q96LM5 186 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 SPATA13Q96N96 652 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 TRIB3Q96RU7 358 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 FEVQ99581 238 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 NRTNQ99748 197 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 EML4Q9HC35 981 aaKnown RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 UTP6Q9NYH9 597 aaKnown RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 TDRKHQ9Y2W6 561 aaKnown RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 YARS2Q9Y2Z4 477 aaKnown RBP3.78□□□□□ -1.8
VPS50-214ENST00000477935 TENM3Q9P273 2699 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 A0A096LNT2 108 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 A0A0A6YYC8 382 aaPredicted RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 A0A1B0GVL5 298 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 A0A1W2PPK0 400 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 ARHGEF33A8MVX0 844 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 H0YGG7 62 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 I3L1I5 382 aaPredicted RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 SMC2O95347 1197 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 PIRTP0C851 137 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 TPBGLP0DKB5 382 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 CD22P20273 847 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 PEBP1P30086 187 aaKnown RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 PCK1P35558 622 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 TNNT3P45378 269 aaPredicted RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 SSR4P51571 173 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 CSE1LP55060 971 aaKnown RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 STX17P56962 302 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 OR4D2P58180 307 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 CSNK2BP67870 215 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 ABRAXAS2Q15018 415 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 DPYSL2Q16555 572 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 ZNF74Q16587 644 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 SNAI3Q3KNW1 292 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 ZNF658BQ4V348 819 aaPredicted RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 FRMPD2BQ6IN97 320 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 DNAJC24Q6P3W2 148 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 CLEC2AQ6UVW9 174 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 FAM151BQ6UXP7 276 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 RBPMS2Q6ZRY4 209 aaKnown RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 LUZP2Q86TE4 346 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 NT5DC3Q86UY8 548 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 CSNK1A1LQ8N752 337 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 SLC37A3Q8NCC5 494 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 OR2L8Q8NGY9 312 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 OR51Q1Q8NH59 317 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 NEIL3Q8TAT5 605 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 RERGQ96A58 199 aaPredicted RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 ULK4Q96C45 1275 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 MUS81Q96NY9 551 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 COPS8Q99627 209 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 NKX3-1Q99801 234 aaPredicted RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 CPNE1Q99829 537 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 SLC39A3Q9BRY0 314 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 SNRNP25Q9BV90 132 aaKnown RBP3.77□□□□□ -1.81
VPS50-214ENST00000477935 CDH20Q9HBT6 801 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 SH2D2AQ9NP31 389 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 DEPPQ9NTK1 212 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 HPF1Q9NWY4 346 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 MED29Q9NX70 200 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms