RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 OR9K2Q8NGE7 335 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF483Q8TF39 744 aaPredicted RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 CIDECQ96AQ7 238 aaPredicted RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 ITPKCQ96DU7 683 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 PBKQ96KB5 322 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 ALKBH3Q96Q83 286 aaPredicted RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 SF3B5Q9BWJ5 86 aaKnown RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 C1QTNF3Q9BXJ4 246 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 PIGUQ9H490 435 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 LIN7BQ9HAP6 207 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 LZTFL1Q9NQ48 299 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 CTPS2Q9NRF8 586 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 NECAP2Q9NVZ3 263 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 AURKAIP1Q9NWT8 199 aaPredicted RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 SEC14L4Q9UDX3 406 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 KCNE5Q9UJ90 142 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 FZR1Q9UM11 496 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 INSIG2Q9Y5U4 225 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 SPIN1Q9Y657 262 aaPredicted RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 CACNG2Q9Y698 323 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 KCNE3Q9Y6H6 103 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 TENM2Q9NT68 2774 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 IGHV3OR16-10A0A075B7F0 116 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 A0A096LPK6 155 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 IGHV1-69-2A0A0G2JMI3 117 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 C17orf100A8MU93 164 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 CLDN25C9JDP6 229 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 NPIPB8E9PQR5 432 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 RPL36A-HNRNPH2H7BZ11 118 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 PGRMC1O00264 195 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 ANKRD28O15084 1053 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 ERLIN1O75477 346 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 IGHMP01871 453 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 HMGN2P05204 90 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 BCKDHAP12694 445 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 HSD17B3P37058 310 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 FRKP42685 505 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 SELENOPP49908 381 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 HTR6P50406 440 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF75DP51815 510 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 GUCY2DQ02846 1103 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 DEFB112Q30KQ8 113 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 PCGF3Q3KNV8 242 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 DCST2Q5T1A1 773 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 FAM205BPQ63HN1 556 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 AP1ARQ63HQ0 302 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 KLC3Q6P597 504 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 R3HCC1LQ7Z5L2 792 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 MDP1Q86V88 176 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 LSRQ86X29 649 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 CELF2-AS1Q8N7Q2 184 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF614Q8N883 585 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 NOA1Q8NC60 698 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 OR52E2Q8NGJ4 325 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 CDC26Q8NHZ8 85 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 ACTRT1Q8TDG2 376 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 PYROXD1Q8WU10 500 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 RAB1CQ92928 201 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 TRIM44Q96DX7 344 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 TIMD4Q96H15 378 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 EGLN2Q96KS0 407 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF75AQ96N20 296 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 GAL3ST1Q99999 423 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 SLC30A2Q9BRI3 323 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 NAA11Q9BSU3 229 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 LINC00470Q9BZP3 86 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 CHIAQ9BZP6 476 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 IQCGQ9H095 443 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 KCNF1Q9H3M0 494 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 SLC6A13Q9NSD5 602 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 B3GNT2Q9NY97 397 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 NKIRAS2Q9NYR9 191 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 DUSP13Q9UII6 198 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF346Q9UL40 294 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 TMCO1Q9UM00 188 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 DSPPQ9NZW4 1301 aa6.19□□□□□ -1.42
SPTLC1-205ENST00000477888 CENPVL1A0A0U1RR11 272 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 DHHO43323 396 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF208O43345 1280 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 CYP7B1O75881 506 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 RBP1P09455 135 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 PPIAL4GP0DN37 164 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 CCNA2P20248 432 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 CD80P33681 288 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 P2RY4P51582 365 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 SH3BGRP55822 239 aaPredicted RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 WDR4P57081 412 aaKnown RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 RPL15P61313 204 aaKnown RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ARF1P84077 181 aaKnown RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ROR2Q01974 943 aaKnown RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 TEKQ02763 1124 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 CLCQ05315 142 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 LCP2Q13094 533 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 LASP1Q14847 261 aaKnown RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF141Q15928 474 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 HFEQ30201 348 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ALKBH6Q3KRA9 238 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 GLIPR1L2Q4G1C9 344 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF385BQ569K4 471 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 PDZK1Q5T2W1 519 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms