RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ERP29P30040 261 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 DUSP8Q13202 625 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 MELKQ14680 651 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PCGF3Q3KNV8 242 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 WBP2NLQ6ICG8 309 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 KIRREL2Q6UWL6 708 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 LYPD4Q6UWN0 246 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 CHRDL2Q6WN34 429 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 DNAAF1Q8NEP3 725 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SVIPQ8NHG7 77 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SYNPRQ8TBG9 265 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ATOH1Q92858 354 aaPredicted RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 KLHL15Q96M94 604 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 INTS14Q96SY0 518 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 MED17Q9NVC6 651 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 RBFOX1Q9NWB1 397 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 RDH8Q9NYR8 311 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 KLHL9Q9P2J3 617 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 KLHL21Q9UJP4 597 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 RARRES3Q9UL19 164 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 V9GY05 133 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 IGKV1-8A0A0C4DH67 115 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 A0A1B0GVI7 797 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 SERTM1A2A2V5 107 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 METTL21EPA6NDL7 271 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 G3V3Y1 287 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 K7EQS6 105 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 HCRTR1O43613 425 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 ECDO95905 644 aaPredicted RBP10.15□□□□□ -0.78
COL27A1-204ENST00000477421 RACK1P63244 317 aaKnown RBP10.15□□□□□ -0.78
COL27A1-204ENST00000477421 GLT8D1Q68CQ7 371 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 FTMTQ8N4E7 242 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 PTGES2Q9H7Z7 377 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 ELOVL3Q9HB03 270 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 PCDHGB2Q9Y5G2 931 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 A0A0G2JMZ2 1700 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 CENPVL1A0A0U1RR11 272 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 SPINT1O43278 529 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 CT62P0C5K7 136 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 LIMS3P0CW19 117 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 LIMS4P0CW20 117 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 EMP2P54851 167 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 CLRN1P58418 232 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 POU3F1Q03052 451 aaPredicted RBP10.15□□□□□ -0.78
COL27A1-204ENST00000477421 SPOCK1Q08629 439 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 SCRN3Q0VDG4 424 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 SNTA1Q13424 505 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 RAET1LQ5VY80 246 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 NIPAL3Q6P499 406 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 THSD4Q6ZMP0 1018 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 RNASE11Q8TAA1 199 aaKnown RBP10.15□□□□□ -0.78
COL27A1-204ENST00000477421 GPR148Q8TDV2 347 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 SNAPC3Q92966 411 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 NKX3-1Q99801 234 aaPredicted RBP10.15□□□□□ -0.78
COL27A1-204ENST00000477421 A3GALT2U3KPV4 340 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 CHD5Q8TDI0 1954 aa10.15□□□□□ -0.78
COL27A1-204ENST00000477421 ARHGEF17Q96PE2 2063 aaPredicted RBP10.15□□□□□ -0.78
COL27A1-204ENST00000477421 HMX3A6NHT5 357 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 M0R233 179 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 UTS2O95399 124 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 CYB5AP00167 134 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 CPEP16870 476 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 CFL1P23528 166 aaKnown RBP10.15□□□□□ -0.79
COL27A1-204ENST00000477421 MAGEB1P43366 347 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 ZMYND11Q15326 602 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 PRAMEF20Q5VT98 475 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 C12orf73Q69YU5 71 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 SLC18B1Q6NT16 456 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 CA13Q8N1Q1 262 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 HOXD1Q9GZZ0 328 aa10.15□□□□□ -0.79
COL27A1-204ENST00000477421 FRKP42685 505 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 SELENBP1Q13228 472 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 EIF2B1Q14232 305 aaKnown RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.14□□□□□ -0.799e-11■□□□□ 10.2
COL27A1-204ENST00000477421 EEF1A1P5Q5VTE0 462 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 HBMQ6B0K9 141 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 KIF18BQ86Y91 864 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 OR13C3Q8NGS6 347 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 OR5J2Q8NH18 312 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 OR52N1Q8NH53 320 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 SLC6A7Q99884 636 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 ARHGAP9Q9BRR9 750 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 CFHR5Q9BXR6 569 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 NXF5Q9H1B4 397 aaKnown RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 LYRM4Q9HD34 91 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 CMC2Q9NRP2 79 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 REV1Q9UBZ9 1251 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 DOCK4Q8N1I0 1966 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 SIP14410 1827 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 TSPAN4O14817 238 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 CSF3P09919 207 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 TGM1P22735 817 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 CRYBA2P53672 197 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 THOC7Q6I9Y2 204 aaKnown RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 LRRC20Q8TCA0 184 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 FAM71F1Q96KD3 344 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 OR5B2Q96R09 309 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 CTRCQ99895 268 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 OR11A1Q9GZK7 315 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms