RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TREML1Q86YW5 311 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 OR5D16Q8NGK9 328 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 OR4F5Q8NH21 305 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 ZNF837Q96EG3 531 aaPredicted RBP13.03□□□□□ -0.32
SMG5-204ENST00000476954 ZNF317Q96PQ6 595 aaPredicted RBP13.03□□□□□ -0.32
SMG5-204ENST00000476954 KRTAP17-1Q9BYP8 105 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 MS4A7Q9GZW8 240 aaPredicted RBP13.03□□□□□ -0.32
SMG5-204ENST00000476954 ZNF385DQ9H6B1 395 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 REEP4Q9H6H4 257 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 GPATCH2Q9NW75 528 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 C1RLQ9NZP8 487 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 TMED7-TICAM2A0A0A6YYA0 188 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 A0A1W2PPW3 197 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 CLPSL1A2RUU4 121 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 HOXA3O43365 443 aaPredicted RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 UGT2B17O75795 530 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 ENO1P06733 434 aaKnown RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 IGHV4-38-2P0DP08 117 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 CDC25BP30305 580 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 GLRXP35754 106 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 PGM1P36871 562 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 CAPZA2P47755 286 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 PLAURQ03405 335 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 KIAA0040Q15053 153 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 GLIPR1L2Q4G1C9 344 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 KPRPQ5T749 579 aaPredicted RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 C11orf87Q6NUJ2 197 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 EMBQ6PCB8 327 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 GLB1L3Q8NCI6 653 aaPredicted RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 ZNF764Q96H86 408 aaPredicted RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 TSSK3Q96PN8 268 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 OR7D2Q96RA2 312 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 GATA5Q9BWX5 397 aaPredicted RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 RSPO3Q9BXY4 272 aaPredicted RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 NMUR2Q9GZQ4 415 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 IQCGQ9H095 443 aaKnown RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 UBAP1Q9NZ09 502 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 BAIAP2L1Q9UHR4 511 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 PURGQ9UJV8 347 aaKnown RBP13.02□□□□□ -0.33
SMG5-204ENST00000476954 MKLN1Q9UL63 735 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 TMED7Q9Y3B3 224 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 AUP1Q9Y679 476 aa13.02□□□□□ -0.33
SMG5-204ENST00000476954 TRAPPC2LH3BP13 241 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 AP3D1O14617 1153 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 TBX19O60806 448 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 ZNF35P13682 527 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 CRYBB2P43320 205 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 RPS26P62854 115 aaKnown RBP13.01□□□□□ -0.33
SMG5-204ENST00000476954 ZNF154Q13106 437 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 PDE7AQ13946 482 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 CEACAM7Q14002 265 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 FXNQ16595 210 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 EPHX4Q8IUS5 362 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 FAM71CQ8NEG0 241 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 GTF3AQ92664 365 aaKnown RBP13.01□□□□□ -0.33
SMG5-204ENST00000476954 TSPAN32Q96QS1 320 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 GAL3ST1Q99999 423 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 SF3B5Q9BWJ5 86 aaKnown RBP13.01□□□□□ -0.33
SMG5-204ENST00000476954 MOV10Q9HCE1 1003 aaKnown RBP13.01□□□□□ -0.33
SMG5-204ENST00000476954 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 FAF1Q9UNN5 650 aaPredicted RBP13.01□□□□□ -0.33
SMG5-204ENST00000476954 CCL27Q9Y4X3 112 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 NOX1Q9Y5S8 564 aa13.01□□□□□ -0.33
SMG5-204ENST00000476954 IGHV1-69-2A0A0G2JMI3 117 aa13□□□□□ -0.33
SMG5-204ENST00000476954 AQP7P3A6NL99 342 aa13□□□□□ -0.33
SMG5-204ENST00000476954 CCDC188H7C350 402 aa13□□□□□ -0.33
SMG5-204ENST00000476954 TRAF3IP2O43734 574 aaPredicted RBP13□□□□□ -0.33
SMG5-204ENST00000476954 SEC22BO75396 215 aa13□□□□□ -0.33
SMG5-204ENST00000476954 CLPTM1O96005 669 aa13□□□□□ -0.33
SMG5-204ENST00000476954 NGFP01138 241 aa13□□□□□ -0.33
SMG5-204ENST00000476954 HLA-HP01893 362 aa13□□□□□ -0.33
SMG5-204ENST00000476954 SDC1P18827 310 aa13□□□□□ -0.33
SMG5-204ENST00000476954 PTMSP20962 102 aa13□□□□□ -0.33
SMG5-204ENST00000476954 IDH2P48735 452 aaKnown RBP13□□□□□ -0.33
SMG5-204ENST00000476954 CCT3P49368 545 aaKnown RBP13□□□□□ -0.33
SMG5-204ENST00000476954 P2RY4P51582 365 aa13□□□□□ -0.33
SMG5-204ENST00000476954 PKNOX1P55347 436 aa13□□□□□ -0.33
SMG5-204ENST00000476954 LCP2Q13094 533 aa13□□□□□ -0.33
SMG5-204ENST00000476954 CALCOCO2Q13137 446 aa13□□□□□ -0.33
SMG5-204ENST00000476954 HLXQ14774 488 aaPredicted RBP13□□□□□ -0.33
SMG5-204ENST00000476954 OR7A5Q15622 319 aa13□□□□□ -0.33
SMG5-204ENST00000476954 ZNF362Q5T0B9 420 aaPredicted RBP13□□□□□ -0.33
SMG5-204ENST00000476954 FIP1L1Q6UN15 594 aaKnown RBP13□□□□□ -0.33
SMG5-204ENST00000476954 USP51Q70EK9 711 aa13□□□□□ -0.33
SMG5-204ENST00000476954 CREB3L2Q70SY1 520 aa13□□□□□ -0.33
SMG5-204ENST00000476954 EIF3MQ7L2H7 374 aaKnown RBP13□□□□□ -0.33
SMG5-204ENST00000476954 IL17RDQ8NFM7 739 aa13□□□□□ -0.33
SMG5-204ENST00000476954 DDIT4LQ96D03 193 aa13□□□□□ -0.33
SMG5-204ENST00000476954 MID1IP1Q9NPA3 183 aa13□□□□□ -0.33
SMG5-204ENST00000476954 PCDHGB4Q9UN71 923 aa13□□□□□ -0.33
SMG5-204ENST00000476954 LIPT2A6NK58 231 aa12.99□□□□□ -0.33
SMG5-204ENST00000476954 CLDN24A6NM45 220 aa12.99□□□□□ -0.33
SMG5-204ENST00000476954 C17orf100A8MU93 164 aa12.99□□□□□ -0.33
SMG5-204ENST00000476954 CLDN25C9JDP6 229 aa12.99□□□□□ -0.33
SMG5-204ENST00000476954 SH3BGRP55822 239 aaPredicted RBP12.99□□□□□ -0.33
SMG5-204ENST00000476954 PIGFQ07326 219 aa12.99□□□□□ -0.33
SMG5-204ENST00000476954 NKPD1Q17RQ9 610 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms