RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 VBP1P61758 197 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 LSM3P62310 102 aaKnown RBP11.96□□□□□ -0.5
PSMB4-204ENST00000476467 FOXD4Q12950 439 aaPredicted RBP11.96□□□□□ -0.5
PSMB4-204ENST00000476467 TMEM44Q2T9K0 475 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 TMEM236Q5W0B7 351 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 Q6ZNX1 250 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 FAM83FQ8NEG4 500 aaPredicted RBP11.96□□□□□ -0.5
PSMB4-204ENST00000476467 OR14L1PQ8NHC6 308 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 POC1BQ8TC44 478 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 DYNC2LI1Q8TCX1 351 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 SLC38A4Q969I6 547 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 REV1Q9UBZ9 1251 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 OSGIN1Q9UJX0 560 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 TMCC3Q9ULS5 477 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 MGAT4BQ9UQ53 548 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 CORINQ9Y5Q5 1042 aa11.96□□□□□ -0.5
PSMB4-204ENST00000476467 J3QRK9 145 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 M0R082 166 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 TFECO14948 347 aaPredicted RBP11.95□□□□□ -0.5
PSMB4-204ENST00000476467 TRAPPC6AO75865 159 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 TCEA1P23193 301 aaKnown RBP11.95□□□□□ -0.5
PSMB4-204ENST00000476467 APOBEC1P41238 236 aaKnown RBP11.95□□□□□ -0.5
PSMB4-204ENST00000476467 NCS1P62166 190 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 RNFT1Q5M7Z0 435 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 DCST1Q5T197 706 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 RAET1LQ5VY80 246 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 LINC00299Q6ZSB3 139 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 RNF217Q8TC41 542 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 WBP1Q96G27 269 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 NPAS1Q99742 590 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 UCK2Q9BZX2 261 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 ZDHHC11Q9H8X9 412 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 GALNT8Q9NY28 637 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 ITPR1Q14643 2758 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 TMED7-TICAM2A0A0A6YYA0 188 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 ELOA3DA6NLF2 546 aaPredicted RBP11.95□□□□□ -0.5
PSMB4-204ENST00000476467 SHISA8B8ZZ34 492 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 M0R3G1 203 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 STSP08842 583 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 OSMP13725 252 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 LIPAP38571 399 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 TMED1Q13445 227 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 IRF3Q14653 427 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 ELOA3BQ3SY89 546 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 YRDCQ86U90 279 aaKnown RBP11.95□□□□□ -0.5
PSMB4-204ENST00000476467 TEX19Q8NA77 164 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 ELOA3Q8NG57 546 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 RPL3LQ92901 407 aaKnown RBP11.95□□□□□ -0.5
PSMB4-204ENST00000476467 TAAR6Q96RI8 345 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 PRSS27Q9BQR3 290 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 PIGQQ9BRB3 760 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 RPH3AQ9Y2J0 694 aaPredicted RBP11.95□□□□□ -0.5
PSMB4-204ENST00000476467 TMED7Q9Y3B3 224 aa11.95□□□□□ -0.5
PSMB4-204ENST00000476467 PIEZO2Q9H5I5 2752 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 A0A087WUJ7 227 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 OR2M5A3KFT3 312 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 SH3D21A4FU49 640 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 MAGEB3O15480 346 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 MPZL2O60487 215 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 WISP1O95388 367 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 CELA3AP09093 270 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 CXCR1P25024 350 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 RBM34P42696 430 aaKnown RBP11.94□□□□□ -0.5
PSMB4-204ENST00000476467 B3GALT5-AS1P59052 145 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 ST3GAL4Q11206 333 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 KLRB1Q12918 225 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 WIPI1Q5MNZ9 446 aaPredicted RBP11.94□□□□□ -0.5
PSMB4-204ENST00000476467 PGBD2Q6P3X8 592 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 LINC00114Q6XXX2 140 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 WDR88Q6ZMY6 472 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 NKAIN4Q8IVV8 208 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 STX19Q8N4C7 294 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 Q8NA96 180 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 LGALS12Q96DT0 336 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 ZNF426Q9BUY5 554 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 ACKR4Q9NPB9 350 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 AKIP1Q9NQ31 210 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 LUZP4Q9P127 313 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.94□□□□□ -0.5
PSMB4-204ENST00000476467 PMF1-BGLAPU3KQ54 211 aa11.94□□□□□ -0.5
PSMB4-204ENST00000476467 SUSD5O60279 629 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 OR10H3O60404 316 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 CRYABP02511 175 aaKnown RBP11.93□□□□□ -0.5
PSMB4-204ENST00000476467 ADORA3P0DMS8 318 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 IDUAP35475 653 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 MAP2K6P52564 334 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 UGT2B15P54855 530 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 FOXK1P85037 733 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 ALDH6A1Q02252 535 aaKnown RBP11.93□□□□□ -0.5
PSMB4-204ENST00000476467 SELENBP1Q13228 472 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 SLC10A1Q14973 349 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 DGUOKQ16854 277 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 TIGD6Q17RP2 521 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.93□□□□□ -0.5
PSMB4-204ENST00000476467 SLX4IPQ5VYV7 408 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 C16orf87Q6PH81 154 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 POMZP3Q6PJE2 187 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 PCSK4Q6UW60 755 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 PTCHD4Q6ZW05 846 aa11.93□□□□□ -0.5
PSMB4-204ENST00000476467 SLC46A3Q7Z3Q1 461 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms