RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 HTR2AP28223 471 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 PPM1AP35813 382 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 OR12D2P58182 307 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 STXBP1P61764 594 aaKnown RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 MRPS6P82932 125 aaKnown RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 TNFRSF9Q07011 255 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 SREBF2Q12772 1141 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 HSPB3Q12988 150 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 RFLNAQ6ZTI6 216 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 XAGE5Q8WWM1 108 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 C14orf79Q96F83 325 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 LRIG1Q96JA1 1093 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 NAA11Q9BSU3 229 aaPredicted RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 EGLN1Q9GZT9 426 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 MED20Q9H944 212 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 ELP3Q9H9T3 547 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 BCL2L10Q9HD36 194 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 FOXJ3Q9UPW0 622 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 KANTRA0A1W2PQU2 76 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 ACOT7O00154 380 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 IMPA2O14732 288 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 NPC1O15118 1278 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 ACTL6AO96019 429 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 CD2P06729 351 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 ELNP15502 786 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 NDUFV2P19404 249 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 BUD31P41223 144 aaPredicted RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 FRKP42685 505 aaPredicted RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 GPR4P46093 362 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 HCCSP53701 268 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 PCBP4P57723 403 aaKnown RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 CARD18P57730 90 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 PPP2CBP62714 309 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 PPP2CAP67775 309 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 ZNF85Q03923 595 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 CBFBQ13951 182 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 SURF2Q15527 256 aaPredicted RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 RPE65Q16518 533 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 DNM1P46Q6ZS02 220 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 BBS10Q8TAM1 723 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 GPBAR1Q8TDU6 330 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 ROBO4Q8WZ75 1007 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 TGM7Q96PF1 710 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 SMAD5Q99717 465 aaKnown RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 EFCAB11Q9BUY7 163 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 HCAR1Q9BXC0 346 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 TSPAN10Q9H1Z9 355 aaPredicted RBP9.73□□□□□ -0.85
ABCF1-205ENST00000475993 UBQLN3Q9H347 655 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 TMEM185BQ9H7F4 350 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 SIRT7Q9NRC8 400 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 SH2B3Q9UQQ2 575 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 PLXND1Q9Y4D7 1925 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 TRPV2Q9Y5S1 764 aa9.73□□□□□ -0.85
ABCF1-205ENST00000475993 CDHR4A6H8M9 788 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 OR14I1A6ND48 311 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 MBTPS2O43462 519 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 TBX19O60806 448 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 SOCS5O75159 536 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 CRTAPO75718 401 aaPredicted RBP9.72□□□□□ -0.85
ABCF1-205ENST00000475993 OR2F2O95006 317 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 IGHV2-5P01817 119 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 SNRPCP09234 159 aaKnown RBP9.72□□□□□ -0.85
ABCF1-205ENST00000475993 PTHLHP12272 177 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 PAX6P26367 422 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 PPP2R1BP30154 601 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 MNDAP41218 407 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 PNLIPRP2P54317 469 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 GLO1Q04760 184 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 OR2F1Q13607 317 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 DHCR24Q15392 516 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 PRPF38BQ5VTL8 546 aaKnown RBP9.72□□□□□ -0.85
ABCF1-205ENST00000475993 PAPD4Q6PIY7 484 aaKnown RBP9.72□□□□□ -0.85
ABCF1-205ENST00000475993 FBXO46Q6PJ61 603 aaPredicted RBP9.72□□□□□ -0.85
ABCF1-205ENST00000475993 ZNF813Q6ZN06 617 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 LRRTM4Q86VH4 590 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 ZNF227Q86WZ6 799 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 GJD3Q8N144 294 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 TNFAIP8L1Q8WVP5 186 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 RAB3CQ96E17 227 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 SAMD8Q96LT4 415 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 SEC11CQ9BY50 192 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 DUSP15Q9H1R2 295 aaPredicted RBP9.72□□□□□ -0.85
ABCF1-205ENST00000475993 ASF1BQ9NVP2 202 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 TMEM72A0PK05 275 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 ACOD1A6NK06 481 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 OR6C76A6NM76 312 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 FGF16O43320 207 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 CHRM4P08173 479 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 SBK2P0C263 348 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 SDHAP31040 664 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 HOXC8P31273 242 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 PYCR1P32322 319 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 ADH7P40394 386 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 RPS11P62280 158 aaKnown RBP eCLIP9.72□□□□□ -0.85
ABCF1-205ENST00000475993 NHLH2Q02577 135 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 ST3GAL3Q11203 375 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 LY6G6FQ5SQ64 297 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 ZNF697Q5TEC3 545 aa9.72□□□□□ -0.85
ABCF1-205ENST00000475993 ARHGAP40Q5TG30 622 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms