RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	PIGW	Q7Z7B1	504 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	C10orf53	Q8N6V4	93 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	MSANTD4	Q8NCY6	345 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	OR52E1	Q8NGJ3	308 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	PGM2	Q96G03	612 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	MCEE	Q96PE7	176 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	VPS35	Q96QK1	796 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	NDN	Q99608	321 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	TUBGCP2	Q9BSJ2	902 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	SNRNP25	Q9BV90	132 aa	Known RBP	3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	C19orf24	Q9BVV8	132 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	CACNG6	Q9BXT2	260 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	KRTAP4-3	Q9BYR4	195 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	PLA2G12A	Q9BZM1	189 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	POLR1E	Q9GZS1	481 aa	Known RBP	3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	ZNF350	Q9GZX5	532 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	DHX35	Q9H5Z1	703 aa	Known RBP	3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	CUTC	Q9NTM9	273 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	FAM120C	Q9NX05	1096 aa	Known RBP	3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	SLCO1C1	Q9NYB5	712 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	FAM215A	Q9Y5M1	114 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	CHD3	Q12873	2000 aa	Known RBP	3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	MGAM2	Q2M2H8	2515 aa		3.76	□□□□□ -1.81
PRKD3-208	ENST00000475912	IGLV3-12	A0A075B6K2	115 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912		A0A087WUV0	522 aa	Predicted RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912		A8MUI8	341 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	CDC40	O60508	579 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	UGT1A9	O60656	530 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	NME6	O75414	186 aa	Predicted RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	SLC16A8	O95907	504 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	HLA-DQB2	P05538	268 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	SLC35G4	P0C7Q5	338 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	TPBGL	P0DKB5	382 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	UGT1A6	P19224	532 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	PEBP1	P30086	187 aa	Known RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	RFC3	P40938	356 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	CDH6	P55285	790 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	SNU13	P55769	128 aa	Known RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	RPL26	P61254	145 aa	Known RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	DMTN	Q08495	405 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	CAPRIN1	Q14444	709 aa	Known RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	MORF4L2	Q15014	288 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	EXOC3L4	Q17RC7	722 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	KBTBD12	Q3ZCT8	623 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	CMPK2	Q5EBM0	449 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	ACER2	Q5QJU3	275 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	LCE3E	Q5T5B0	92 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	RTL6	Q6ICC9	239 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	KLHL10	Q6JEL2	608 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	TMEM220	Q6QAJ8	160 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	KDELC1	Q6UW63	502 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	LRRC75A-AS1	Q8N1F1	130 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	BBS5	Q8N3I7	341 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	ATPAF2	Q8N5M1	289 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	LINC00612	Q8N6U2	182 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	NAT8L	Q8N9F0	302 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	CCDC63	Q8NA47	563 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	C17orf47	Q8NEP4	570 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	NELFB	Q8WX92	580 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	3.75	□□□□□ -1.81	3e-8	■■■■■ 70.6
PRKD3-208	ENST00000475912	DHTKD1	Q96HY7	919 aa	Predicted RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	RBM41	Q96IZ5	413 aa	Known RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	IMMP1L	Q96LU5	166 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	FAM218A	Q96MZ4	157 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	GAL3ST4	Q96RP7	486 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	TRIB3	Q96RU7	358 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	PCDHB18P	Q96TA0	734 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	TTYH2	Q9BSA4	534 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	CNPY3	Q9BT09	278 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	CHRNA10	Q9GZZ6	450 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	CLSTN2	Q9H4D0	955 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	SRD5A3	Q9H8P0	318 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	UGT1A7	Q9HAW7	530 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	UGT1A10	Q9HAW8	530 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	UGT1A8	Q9HAW9	530 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	IARS2	Q9NSE4	1012 aa	Known RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	PNPLA3	Q9NST1	481 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	RMND1	Q9NWS8	449 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	EURL	Q9NYK6	297 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	STOX2	Q9P2F5	926 aa	Predicted RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	PCSK1N	Q9UHG2	260 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	TP53TG3	Q9ULZ0	132 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	GPR132	Q9UNW8	380 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	RPL26L1	Q9UNX3	145 aa	Known RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	PLCL2	Q9UPR0	1127 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	RUVBL2	Q9Y230	463 aa	Known RBP	3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	SNX5	Q9Y5X3	404 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	COLEC10	Q9Y6Z7	277 aa		3.75	□□□□□ -1.81
PRKD3-208	ENST00000475912	NOTCH1	P46531	2555 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912	IGHV3-20	A0A0C4DH32	117 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912		A0A0J9YY10	115 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912	LRRD1	A4D1F6	860 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912	MGAT4D	A6NG13	374 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912	SDR42E2	A6NKP2	422 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912	SIGLEC16	A6NMB1	481 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912		F8VZ95	297 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912	PRPSAP2	O60256	369 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912	NME2P1	O60361	137 aa		3.74	□□□□□ -1.81
PRKD3-208	ENST00000475912	SMPD2	O60906	423 aa		3.74	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms