RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 GPR151Q8TDV0 419 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 GEMIN6Q8WXD5 167 aaKnown RBP3.96□□□□□ -1.78
USP4-209ENST00000475873 RAB40AQ8WXH6 277 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 IQCDQ96DY2 449 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 ELP4Q96EB1 424 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 CERS2Q96G23 380 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 ZNF317Q96PQ6 595 aaPredicted RBP3.96□□□□□ -1.78
USP4-209ENST00000475873 CITED4Q96RK1 184 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 SIGLEC11Q96RL6 698 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 ATOH8Q96SQ7 321 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 CCDC106Q9BWC9 280 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 CDADC1Q9BWV3 514 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 SHCBP1LQ9BZQ2 653 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 TSPYL1Q9H0U9 437 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 GLIPR2Q9H4G4 154 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 PIF1Q9H611 641 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 SAP30LQ9HAJ7 183 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 CTPS2Q9NRF8 586 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 UBQLN4Q9NRR5 601 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 INPP5EQ9NRR6 644 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 GIN1Q9NXP7 522 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.96□□□□□ -1.78
USP4-209ENST00000475873 OR5V1Q9UGF6 321 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 IL20RAQ9UHF4 553 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 VPREB3Q9UKI3 123 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 ZNF346Q9UL40 294 aaKnown RBP3.96□□□□□ -1.78
USP4-209ENST00000475873 PSME2Q9UL46 239 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 RCE1Q9Y256 329 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 ACOT9Q9Y305 439 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 NPTNQ9Y639 398 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 USH1CQ9Y6N9 552 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 DNAH11Q96DT5 4516 aa3.96□□□□□ -1.78
USP4-209ENST00000475873 DNAH2Q9P225 4427 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 ZC3H12DA2A288 527 aaKnown RBP3.95□□□□□ -1.78
USP4-209ENST00000475873 ZSCAN5BA6NJL1 495 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 CEACAM18A8MTB9 384 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 ZNF587BE7ETH6 402 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 POC1B-GALNT4F8VUJ3 575 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 RNASEK-C17orf49H0YIS7 233 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 SCDO00767 359 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 FBXO24O75426 580 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 TGDSO95455 350 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 CHRM2P08172 466 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 WNT2P09544 360 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 CCDC159P0C7I6 412 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 OR8G3PP0DMU2 310 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 VSIG10L2P0DP72 767 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 TFPIP10646 304 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 ZNF250P15622 560 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 PGAM1P18669 254 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 SLC6A2P23975 617 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 MAGEA8P43361 318 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 OR2B6P58173 313 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 ROR2Q01974 943 aaKnown RBP3.95□□□□□ -1.78
USP4-209ENST00000475873 TEKQ02763 1124 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 PLAURQ03405 335 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 MERTKQ12866 999 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 COX10Q12887 443 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 TBX2Q13207 712 aaPredicted RBP3.95□□□□□ -1.78
USP4-209ENST00000475873 SKP2Q13309 424 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 HABP2Q14520 560 aaPredicted RBP3.95□□□□□ -1.78
USP4-209ENST00000475873 RAB39AQ14964 217 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 TMEM155Q4W5P6 130 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 SGO1Q5FBB7 561 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 COX20Q5RI15 118 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 STEAP4Q687X5 459 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 TMEM154Q6P9G4 183 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 DRICH1Q6PGQ1 229 aaPredicted RBP3.95□□□□□ -1.78
USP4-209ENST00000475873 LRRN1Q6UXK5 716 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 FRRS1Q6ZNA5 592 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 AAED1Q7RTV5 226 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 PAGE2Q7Z2X7 111 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 GOLGA7Q7Z5G4 137 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 ISCA2Q86U28 154 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 LRRC28Q86X40 367 aaPredicted RBP3.95□□□□□ -1.78
USP4-209ENST00000475873 SBSPONQ8IVN8 264 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 ZBED8Q8IZ13 594 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 GALNT4Q8N4A0 578 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 NAT8LQ8N9F0 302 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 SDR9C7Q8NEX9 313 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 OR4F17Q8NGA8 305 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 OR5W2Q8NH69 310 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 RFWD2Q8NHY2 731 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 FGFBP3Q8TAT2 258 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 C10orf82Q8WW14 230 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 LRRC39Q96DD0 335 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 CCDC126Q96EE4 140 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 ELMOD3Q96FG2 381 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 HES6Q96HZ4 224 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 UBXN10Q96LJ8 280 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 AMDHD1Q96NU7 426 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 FRG2BQ96QU4 278 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 OR4F4Q96R69 305 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 DCLRE1CQ96SD1 692 aaKnown RBP3.95□□□□□ -1.78
USP4-209ENST00000475873 NMUR2Q9GZQ4 415 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 PPA2Q9H2U2 334 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 SERHL2Q9H4I8 314 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 ALG9Q9H6U8 611 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 EDA2RQ9HAV5 297 aa3.95□□□□□ -1.78
USP4-209ENST00000475873 XAB2Q9HCS7 855 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms