RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 EPHX4Q8IUS5 362 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 P3H2Q8IVL5 708 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 PARP8Q8N3A8 854 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 C10orf53Q8N6V4 93 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 PACRGLQ8N7B6 248 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 ICA1LQ8NDH6 482 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 OR9Q2Q8NGE9 314 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 WNT2BQ93097 391 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 FAM46AQ96IP4 442 aaKnown RBP13.57□□□□□ -0.24
MCF2L-224ENST00000475524 ZFP3Q96NJ6 502 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 FEVQ99581 238 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 RBM4BQ9BQ04 359 aaKnown RBP13.57□□□□□ -0.24
MCF2L-224ENST00000475524 TUBA1CQ9BQE3 449 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 TACO1Q9BSH4 297 aaKnown RBP13.57□□□□□ -0.24
MCF2L-224ENST00000475524 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
MCF2L-224ENST00000475524 SF3B5Q9BWJ5 86 aaKnown RBP13.57□□□□□ -0.24
MCF2L-224ENST00000475524 SRXN1Q9BYN0 137 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 RNF122Q9H9V4 155 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 CHST11Q9NPF2 352 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 PNPLA3Q9NST1 481 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 RASD1Q9Y272 281 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 POFUT2Q9Y2G5 429 aa13.57□□□□□ -0.24
MCF2L-224ENST00000475524 NPIPB13A6NJU9 1138 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 CLCA1A8K7I4 914 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 NPIPB4C9JG80 1138 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 H0YC42 278 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 M0R082 166 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 SMAD9O15198 467 aaKnown RBP13.56□□□□□ -0.24
MCF2L-224ENST00000475524 CYTIPO60759 359 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 ATP6V1G2O95670 118 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 GASTP01350 101 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 OPN1LWP04000 364 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 ACVR2AP27037 513 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 UQCRC1P31930 480 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 GPR4P46093 362 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 P2RY4P51582 365 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 SLC16A1P53985 500 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 CASP6P55212 293 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 TPD52P55327 224 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-224ENST00000475524 LSM11P83369 360 aaKnown RBP eCLIP13.56□□□□□ -0.24
MCF2L-224ENST00000475524 SRYQ05066 204 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 C19orf57Q0VDD7 668 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 RNPS1Q15287 305 aaKnown RBP13.56□□□□□ -0.24
MCF2L-224ENST00000475524 ZBED5Q49AG3 693 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 OTUD3Q5T2D3 398 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-224ENST00000475524 KDM4DQ6B0I6 523 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 RASSF6Q6ZTQ3 369 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 OAFQ86UD1 273 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 CD163Q86VB7 1156 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 ZNF843Q8N446 348 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 ATG16L2Q8NAA4 619 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 ZNF417Q8TAU3 575 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 RNF128Q8TEB7 428 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 EME1Q96AY2 570 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 SLC25A36Q96CQ1 311 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 ZNF587Q96SQ5 575 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-224ENST00000475524 TM9SF2Q99805 663 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 GLRX2Q9NS18 164 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 KIF17Q9P2E2 1029 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 SIGLEC7Q9Y286 467 aa13.56□□□□□ -0.24
MCF2L-224ENST00000475524 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 MBD3L3A6NE82 208 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 UNC119BA6NIH7 251 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 SLC22A20A6NK97 555 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 SAC3D1A6NKF1 404 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 PLPP3O14495 311 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 CDC42EP2O14613 210 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 RCBTB2O95199 551 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 PUDPQ08623 228 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 FOXD4Q12950 439 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 PMS2P3Q13401 168 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 DAG1Q14118 895 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 PON3Q15166 354 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 TRIP10Q15642 601 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 C3AR1Q16581 482 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 RFX4Q33E94 735 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 C1orf185Q5T7R7 199 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 OGFRL1Q5TC84 451 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 OR2A2Q6IF42 318 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 ZNF620Q6ZNG0 422 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 FCRLAQ7L513 359 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 PXKQ7Z7A4 578 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 HS3ST5Q8IZT8 346 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 MBD3L2Q8NHZ7 208 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 ZNF845Q96IR2 970 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 RDH12Q96NR8 316 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 GPX7Q96SL4 187 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 CIB1Q99828 191 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 UCK2Q9BZX2 261 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 IL20Q9NYY1 176 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 KLHL9Q9P2J3 617 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 TNFRSF10DQ9UBN6 386 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 PHF3Q92576 2039 aaKnown RBP13.55□□□□□ -0.24
MCF2L-224ENST00000475524 ZGRF1Q86YA3 2104 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 SVILO95425 2214 aa13.55□□□□□ -0.24
MCF2L-224ENST00000475524 IGKV3D-15A0A087WSY6 115 aa13.54□□□□□ -0.24
MCF2L-224ENST00000475524 EIF4E1BA6NMX2 242 aaKnown RBP13.54□□□□□ -0.24
MCF2L-224ENST00000475524 GPR171O14626 319 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms