RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 GRPRP30550 384 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 TTKP33981 857 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 EMX1Q04741 257 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 FOXC1Q12948 553 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 TBCEQ15813 527 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 CRTC2Q53ET0 693 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 KLHL22Q53GT1 634 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 SLC6A19Q695T7 634 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 NIPAL3Q6P499 406 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 PLBD1Q6P4A8 553 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 CCDC81Q6ZN84 652 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 LINC00696Q6ZRV3 163 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 GTPBP8Q8N3Z3 284 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 LRRC75AQ8NAA5 344 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 ATP6V1C2Q8NEY4 427 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 MFSD8Q8NHS3 518 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 C9orf43Q8TAL5 461 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 FCGR1BQ92637 280 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 MUL1Q969V5 352 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 OTULINQ96BN8 352 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 GNRHR2Q96P88 292 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 KATNB1Q9BVA0 655 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 MRPL39Q9NYK5 338 aaKnown RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 BOKQ9UMX3 212 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 POLHQ9Y253 713 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 CORINQ9Y5Q5 1042 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 H3BML4 177 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 IMPA2O14732 288 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 NEURL1O76050 574 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 WDPCPO95876 746 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 F10P00742 488 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 ZNF17P17021 662 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 WT1P19544 449 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-210ENST00000475329 FKBP2P26885 142 aaKnown RBP12.39□□□□□ -0.43
TRAF4-210ENST00000475329 ACVR2AP27037 513 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 HTR1FP30939 366 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 MAP2K4P45985 399 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 MTNR1AP48039 350 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 CTXN1P60606 82 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 ERVK-25P63136 954 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAF4-210ENST00000475329 CDC20Q12834 499 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 ITGADQ13349 1161 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 CRMP1Q14194 572 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 RAB39AQ14964 217 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 OR1C1Q15619 314 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 AGAP7PQ5VUJ5 663 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 BORAQ6PGQ7 559 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 SCAIQ8N9R8 606 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 FAM98AQ8NCA5 519 aaKnown RBP12.39□□□□□ -0.43
TRAF4-210ENST00000475329 BBS1Q8NFJ9 593 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 OR5M1Q8NGP8 315 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 FAR1Q8WVX9 515 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 RORBQ92753 470 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 TMIGD2Q96BF3 282 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 RNFT2Q96EX2 444 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 DNAJA3Q96EY1 480 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 TMEM80Q96HE8 168 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 AGAP4Q96P64 663 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 FAM173AQ9BQD7 235 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 ACOT13Q9NPJ3 140 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 KLHL1Q9NR64 748 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
TRAF4-210ENST00000475329 ALKBH4Q9NXW9 302 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 KLK13Q9UKR3 277 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 ADAM18Q9Y3Q7 739 aa12.39□□□□□ -0.43
TRAF4-210ENST00000475329 LRRC3CA6NJW4 275 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 A6NL46 340 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 FAM183AA6NL82 134 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 ZNF99A8MXY4 864 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-210ENST00000475329 M0R082 166 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 EFNA2O43921 213 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 FZD7O75084 574 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 OR6A2O95222 327 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 RAB36O95755 333 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 ADORA3P0DMS8 318 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 HIST1H1CP16403 213 aaKnown RBP12.38□□□□□ -0.43
TRAF4-210ENST00000475329 IL11P20809 199 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 C21orf33P30042 268 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-210ENST00000475329 SDHAP31040 664 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 SRD5A2P31213 254 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 CLK1P49759 484 aaKnown RBP12.38□□□□□ -0.43
TRAF4-210ENST00000475329 RAB40BQ12829 278 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 MFAP5Q13361 173 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 TMED1Q13445 227 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 IRF3Q14653 427 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 OR7A5Q15622 319 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 GLYR1Q49A26 553 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-210ENST00000475329 EMC4Q5J8M3 183 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 ARMC4Q5T2S8 1044 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 RAET1LQ5VY80 246 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 GPR139Q6DWJ6 353 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 GTF2IRD2BQ6EKJ0 949 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 MEPCEQ7L2J0 689 aaKnown RBP12.38□□□□□ -0.43
TRAF4-210ENST00000475329 GTF2IRD2Q86UP8 949 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 JAZF1Q86VZ6 243 aa12.38□□□□□ -0.43
TRAF4-210ENST00000475329 SLC37A3Q8NCC5 494 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms