RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CPXM2Q8N436 756 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM161BQ8NDZ6 487 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OR51S1Q8NGJ8 323 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SCAMP5Q8TAC9 235 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 THAP4Q8WY91 577 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 MYLPFQ96A32 169 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CMKLR1Q99788 373 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 AGPAT1Q99943 283 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 HRASLSQ9HDD0 168 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SAYSD1Q9NPB0 183 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 PRSS16Q9NQE7 514 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 AJAP1Q9UKB5 411 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 RNF6Q9Y252 685 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 UBE2J1Q9Y385 318 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 FIS1Q9Y3D6 152 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 V9GYH0 126 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 A0A087WZY1 265 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SGK494L7N484 410 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CTSVO60911 334 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OR6A2O95222 327 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 NFATC1O95644 943 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 HPRT1P00492 218 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SELPP16109 830 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 ANKRD55Q3KP44 614 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CBWD6Q4V339 395 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CBWD3Q5JTY5 395 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CBWD5Q5RIA9 395 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM42Q69YG0 159 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 PAQR9Q6ZVX9 377 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CHMP1BQ7LBR1 199 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SLC29A4Q7RTT9 530 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 RD3Q7Z3Z2 195 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 FAM46DQ8NEK8 389 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OR5T3Q8NGG3 340 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OR13C8Q8NGS7 320 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OR13J1Q8NGT2 312 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 NPRL2Q8WTW4 380 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CCDC74AQ96AQ1 378 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 FAAP24Q9BTP7 215 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 ADAT1Q9BUB4 502 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 C1orf43Q9BWL3 253 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 GALNT9Q9HCQ5 603 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 FAM49BQ9NUQ9 324 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CARHSP1Q9Y2V2 147 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 LRP12Q9Y561 859 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 ALPK3Q96L96 1907 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KIR2DL5BA0A0G2JN68 375 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KIR2DL5BA0A0G2JPC4 375 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 A0A1W2PQH9 124 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 OR11H12B2RN74 326 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KCNK1O00180 336 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 GPR31O00270 319 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 MANBAO00462 879 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KLF11O14901 512 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PRAMEF1O95521 474 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 UBCP0CG48 685 aaKnown RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 DRD2P14416 443 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 GOT1P17174 413 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TFE3P19532 575 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 DGKAP23743 735 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KIR2DL1P43626 348 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 RFX3P48380 749 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 RAB1AP62820 205 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 MRPS6P82932 125 aaKnown RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 USF2Q15853 346 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ZIC1Q15915 447 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF79Q15937 498 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 HAGHQ16775 308 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PLPPR5Q32ZL2 321 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 C4orf48Q5BLP8 95 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 LRRC73Q5JTD7 316 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PLET1Q6UQ28 207 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 Q7L0L9 218 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 APCDD1Q8J025 514 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KIR2DL5AQ8N109 375 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 UXS1Q8NBZ7 420 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 DNAAF1Q8NEP3 725 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 OR11H1Q8NG94 326 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 OR4K1Q8NGD4 311 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 OR11H2Q8NH07 326 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 LCN9Q8WX39 176 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ACOT11Q8WXI4 607 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TM4SF19Q96DZ7 209 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CCDC126Q96EE4 140 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CBWD1Q9BRT8 395 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 THAP7Q9BT49 309 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 RDH8Q9NYR8 311 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 UBQLN2Q9UHD9 624 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF236Q9UL36 1845 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 IGHV2-70DA0A0C4DH43 119 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 IFNL4K9M1U5 179 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PIP5K1BO14986 540 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TNFSF14O43557 240 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 LSM8O95777 96 aaKnown RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 AMD1P17707 334 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 IL12AP29459 219 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CDX1P47902 265 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CSNK1A1P48729 337 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KCNQ1P51787 676 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms