RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 NPFFR2Q9Y5X5 522 aa8.92□□□□□ -0.98
USP39-214ENST00000474572 UNC13CQ8NB66 2214 aa8.92□□□□□ -0.98
USP39-214ENST00000474572 ASXL3Q9C0F0 2248 aa8.92□□□□□ -0.98
USP39-214ENST00000474572 EYSQ5T1H1 3165 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 GON4LQ3T8J9 2241 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TEX13CA0A0J9YWL9 993 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 CDC14CA4D256 554 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 ANKRD61A6NGH8 418 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 CD8B2A6NJW9 211 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TMEM200CA6NKL6 621 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 ETV2O00321 342 aaPredicted RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 DVL2O14641 736 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 RGS5O15539 181 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 HCRTR2O43614 444 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 IGHMP01871 453 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 HEXBP07686 556 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 CD8BP10966 210 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 GP1BBP13224 206 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 PI4KAP42356 2102 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 CDKN2AP42771 156 aaKnown RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 POLR2HP52434 150 aaKnown RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 SLC16A1P53985 500 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 NRG3P56975 720 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 OR12D2P58182 307 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 CTXN1P60606 82 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 ERVK-25P63136 954 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 RPL18Q07020 188 aaKnown RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 SIGLEC14Q08ET2 396 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 DBPQ10586 325 aaPredicted RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 TRA2AQ13595 282 aaKnown RBP eCLIP8.91□□□□□ -0.98
USP39-214ENST00000474572 DNASE1L3Q13609 305 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 CDK5R1Q15078 307 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 PON3Q15166 354 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 QPRTQ15274 297 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TOMM34Q15785 309 aaPredicted RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 CCDC58Q4VC31 144 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 MESTQ5EB52 335 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 ZNF684Q5T5D7 378 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 DDI2Q5TDH0 399 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 MRPL14Q6P1L8 145 aaKnown RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 LEG1Q6P5S2 330 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 XKRXQ6PP77 449 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 C5orf46Q6UWT4 87 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 LYPD8Q6UX82 237 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TRILQ7L0X0 811 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 GRINAQ7Z429 371 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 NANOGNBQ7Z5D8 188 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TPRA1Q86W33 373 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 MS4A15Q8N5U1 240 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 RFLNBQ8N5W9 214 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 DEFB123Q8N688 67 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 EID2Q8N6I1 236 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 BMPERQ8N8U9 685 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 GDPD1Q8N9F7 314 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 LSM14AQ8ND56 463 aaKnown RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 OR5J2Q8NH18 312 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 CEP76Q8TAP6 659 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 IFI44Q8TCB0 444 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 STK35Q8TDR2 534 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 GPR119Q8TDV5 335 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 ACOT12Q8WYK0 555 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 PIGKQ92643 395 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TAAR8Q969N4 342 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 KCTD12Q96CX2 325 aaKnown RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 TMCO6Q96DC7 493 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 ITPKCQ96DU7 683 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 SMIM19Q96E16 107 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 PELI1Q96FA3 418 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 MRPL48Q96GC5 212 aaKnown RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 TSPAN32Q96QS1 320 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 UBL7Q96S82 380 aaPredicted RBP8.91□□□□□ -0.98
USP39-214ENST00000474572 NMNAT3Q96T66 252 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 SLC7A5P2Q9GIP4 190 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TPK1Q9H3S4 243 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 GAREM1Q9H706 876 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 MARCH7Q9H992 704 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 FSCN3Q9NQT6 498 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 POLE4Q9NR33 117 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 KLHL1Q9NR64 748 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TAS2R10Q9NYW0 307 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TBC1D24Q9ULP9 559 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 COPS3Q9UNS2 423 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 TRIOBPQ9H2D6 2365 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 KNL1Q8NG31 2342 aa8.91□□□□□ -0.98
USP39-214ENST00000474572 IGHV3-20A0A0C4DH32 117 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 A0A0G2JK05 382 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 TMEM72A0PK05 275 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 ANKUB1A6NFN9 424 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 C17orf51A8MQB3 221 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 J3QLW9 94 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 ZNF354AO60765 605 aaPredicted RBP8.9□□□□□ -0.98
USP39-214ENST00000474572 DKK1O94907 266 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 CER1O95813 267 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 HLA-DQB1P01920 261 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 IL7P13232 177 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 ZNF19P17023 458 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 CXCR1P25024 350 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 CD97P48960 835 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 EMP2P54851 167 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 CAV3P56539 151 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms